Gossypium arboreum (tree cotton): 108487195
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Entry
108487195 CDS
T05776
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108487195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108487195
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108487195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Motif
Other DBs
NCBI-GeneID:
108487195
NCBI-ProteinID:
XP_017646957
UniProt:
A0ABR0QIY3
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Position
3:complement(21689294..21692816)
Genome browser
AA seq
424 aa
AA seq
DB search
MFGAQASTSAFGTPSSTPAFGTPSSTPAFGTPSSTPAFGATSSTPAFGTPSSTPAFGTPS
STPAFGTPSSTPAFGAPSSTPAFGTPSSTPAFGTPSTPSFATGFGGSSLFSTPFSSQTQQ
QQTSLFQQPQPSIAAPSSGFGFQTSLSAPPFPNAQLTTQMAPVAPVPFSLADRDIQAIVD
AYKEEAGNPKYAFKHLLFSVIEPQFRGKPAGVSDIMWAEAMAKLEGMESSDRERLWPQLV
QGFKDLSQRLKLQDEVIASDAERLRMTQSNVKMLQRHFQAETLPWIQRMRQKEQSLQRRL
LKMMRILEALEGKGCRVPLMKGEVELAEKLAAITRQLKGSGAELSRRVQNLLTISRVQAN
AIGAGGSLYLPGSTKIHEQSLADMQEVLQQQTEAIARLGNVLKRDIRDMEIIMAEDTDMT
ENVN
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgttcggagctcaagcttccacttctgccttcggcactccttcttccacccctgccttt
ggcactccttcttccaccccggcctttggaactccttcttcaactccggcttttggggct
acttcttccacaccggcatttggcactccgtcttcgacaccggcgtttggcactccatct
tcgacaccggcgtttggcactccgtcttcgacacctgcgtttggggctccgtcttcgaca
ccggcatttggaactccgtcctcgacaccggcttttggaactccctcaacgccgtctttc
gctacgggctttggcggctcctctcttttctccaccccattctcttctcaaacgcaacag
caacagacttcattgtttcagcaaccacagccatccatcgcggcaccctctagtggtttc
ggattccagacttcgttatccgcccctcctttccccaatgctcaattgacaactcaaatg
gctcccgtggcccctgtccccttctctcttgccgatcgtgacattcaagcgattgtggat
gcttacaaagaggaggctgggaaccctaagtatgctttcaagcatttgttgttcagtgta
attgaaccacagttcaggggaaagccagctggtgtttcagatataatgtgggcagaagct
atggcaaaactggagggtatggagagttctgatcgggaaagactctggcctcagcttgtt
cagggttttaaggatctttcacagcggttgaagctacaagacgaagtcattgcttcagat
gctgagaggttgcgaatgacccagagcaatgtgaaaatgcttcaaaggcattttcaagct
gaaactcttccatggatccagagaatgagacaaaaggagcaaagcctccaaagacgcctc
ttaaagatgatgagaatactggaagcattagaaggtaagggttgccgtgtgcctttaatg
aaaggggaagttgaattggctgagaagttggctgcaataactagacagttgaaaggatct
ggagctgaactttctaggagggttcaaaacctcctaaccatatctcgtgttcaagcaaat
gctattggtgctggaggttctctttatcttccaggatcaactaaaatacatgagcagagt
cttgccgatatgcaggaggtattacaacagcaaacagaggccattgcaaggcttggcaac
gttttgaagcgagatatcagggatatggagataataatggctgaagacacggatatgacg
gaaaatgtgaattag
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