Gossypium arboreum (tree cotton): 108487226
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Entry
108487226 CDS
T05776
Name
(RefSeq) homeobox-leucine zipper protein PROTODERMAL FACTOR 2-like
KO
K09338
homeobox-leucine zipper protein
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gab03000
]
108487226
Transcription factors [BR:
gab03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
108487226
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
MRP-L20
HTH_47
DUF8054_C
Motif
Other DBs
NCBI-GeneID:
108487226
NCBI-ProteinID:
XP_052876675
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Position
10:complement(1189189..1193628)
Genome browser
AA seq
744 aa
AA seq
DB search
MFNSDLYENPNMFDMFQRPSDSDQTERDDDNNDTKSGTEVDAPSADDDNQGPASSGPSRR
RAKRKRYHRHTQRQIQEMEALFKECPHPDDKQRKQLSRELGLDPLQVKFWFQNKRTQLKA
QTERHENGLLKAENEKLRAENHRYKEALNNASCPTCGGPAALGEMSFEEQHLRLENARLR
EEIERISGVTAKYVGKPIGPSFSRFADRAPISFGTQPGFLGEYGGPGGAAGGPGVGAGGP
GGGLGEVLRPVSVTNEADKPLIVELAVTAMEELIRMAQSGEPLWVTDENSIDVLNENEYL
RIFPRGIGSKPFANLGFRSEASREAAVIIMNPVNLVEILMDVNQWSTVFCGIVSRAMTLD
VLSTGVAGNYNGALQVMTAEFQLPSPLVPTRENYFARYCKRHHDGIWAVVDVSLDNLRHA
PFTRCRRRPSGCLIQELPNGYSKVIWVENVEVDDRGVSDIYKTLVNTSLAFGAKRWVATL
DRQCERLASAMANNIPAGDLGVLNSSDGRKSILKLAERMVNSFCTGVGASTAHAWTTLTG
SDEIRVMTRKSIDDPGRPPGIVLSAATSFWVAVPPRKAFNILRSEKFRSEWDILSNGGVV
DEMAHIANGRDPGNCVSLLRVNGANASQSNMLILQESSNDATGSYVIYAPVDFAAMNIVL
NGGDPDYVALLPSGFAILPDREGPNRGIGITEIGSGGSLVTLAFQILVDSAPNSKISVGS
VATVNSLIKCTLERIRTAVMCNDA
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgttcaactccgacttatatgaaaatcccaacatgttcgatatgttccaaaggccgtct
gatagtgaccagacggaaagggacgatgataataacgatacaaaatcaggtactgaagta
gatgcaccatctgctgatgatgataatcaaggtcctgcttctagtggacctagccgtcgt
cgtgcaaaaaggaagcgttaccaccgtcatactcagcgacaaatccaagaaatggaagcc
ttgttcaaagagtgtcctcatccagatgataagcaaaggaaacaactcagtcgtgagtta
gggttagacccactgcaagtcaagttttggttccaaaacaagcgtacccaactcaaggcc
caaactgaacgccatgaaaatggtttgttaaaggctgagaatgaaaagcttcgtgctgag
aaccataggtacaaggaagctcttaacaatgcttcatgccccacctgtggtggacctgct
gctctcggagagatgtcatttgaagaacaacatttgaggctcgaaaatgctcggttaaga
gaagagattgaaaggatatctggagtgacagcaaaatatgttggcaagcctataggccct
tcgttttctcgctttgctgatagagcgcctatcagttttggaacccaaccagggtttcta
ggagagtatggtggtcctggtggtgctgctggtggccctggtgttggtgctggtggtcct
ggtggtggtcttggtgaggttttaaggccagtctctgtgaccaatgaagctgataagcct
ttgattgttgagctcgcagttacagcaatggaggaactaattagaatggctcaatctggt
gaaccattgtgggttactgatgagaattcaattgatgtgttgaatgaaaatgaatacttg
agaattttccctaggggtattggatcaaaaccatttgcaaatttggggttcagatctgaa
gcttcaagggaagctgctgttattattatgaaccctgttaacctagttgagattctcatg
gatgtgaatcaatggtctacggtgttttgtggtattgtttcaagggctatgactttagat
gttctatcaactggtgtagcaggaaactacaatggagccttgcaagtgatgacagctgag
tttcaactcccttcaccactcgtacctactagggagaactatttcgctaggtactgtaaa
cgacaccatgacggaatttgggcggtggtcgatgtttcattggataatttacgccatgct
ccattcaccagatgtagaagacgaccctcgggttgtttgatccaagaattaccaaatgga
tactcaaaggttatatgggtggaaaatgttgaagtggatgatagaggtgtcagtgacata
tacaaaacattagtgaatactagtttagcttttggggctaaacgatgggtggctacatta
gatcgacaatgtgaacgtcttgcaagtgcaatggctaataacattccagctggggatcta
ggcgttttaaatagctctgatggaaggaaaagtatcctgaaattagctgaaaggatggtg
aatagcttttgtaccggagtcggagcttcgaccgctcatgcttggacgactttaacggga
tccgatgaaattagggtcatgaccaggaagagtattgacgatccgggcagacctcctggt
attgttctaagtgctgcaacttccttctgggtcgctgttccgcctaggaaagcattcaat
atccttaggtccgagaaatttcgaagcgagtgggatatcctttcaaacggtggtgttgtt
gatgaaatggctcatatagctaatggacgtgatccaggcaactgtgtctccttacttagg
gttaatggtgcaaacgcaagccaaagcaacatgttaatcctacaagagagcagcaatgat
gctacagggtcctatgtgatttatgccccggtcgatttcgccgctatgaacatagtctta
aacggcggagaccctgattacgtcgcgcttttaccttctggtttcgcgatacttcccgac
cgtgaaggacctaacagaggaatagggatcacggaaatcggctccggcgggtcactcgtt
acccttgcgttccaaatcttagttgattctgctccgaattcgaaaatctctgtgggatcc
gtggctactgtgaatagcctaatcaaatgcactcttgaaaggatcagaactgcggtcatg
tgtaatgacgcttga
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