Gossypium arboreum (tree cotton): 108487311
Help
Entry
108487311 CDS
T05776
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108487311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108487311
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108487311
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
108487311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
108487311
NCBI-ProteinID:
XP_017647110
UniProt:
A0A0B0NLD3
LinkDB
All DBs
Position
10:complement(114601616..114604784)
Genome browser
AA seq
308 aa
AA seq
DB search
MAPGGGSCKEVIESRVTFSDYDMATSSVDLRGSPLRKTATALSGNLGSTSMNDVHELLEC
PVCVNLMYPPIYQCPNGHTVCSTCKTRVHNCCPTCRNELGNIRCLALEKVAKSLELPCSY
QILGCHDIFPYYSKLKHEKNCRYRPYSCPYAGAECSVTGDIPFLVMHLKNDHRVDMHDGC
TFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFHIGMAPVYMAFLRFMGDEDEAR
QFSYSLEVGGSGRKFMWQGVPRSIRDSHRKVRDSQDGLIIQRNLALYFSGGDRQELKLKV
AGRIWKEQ
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctggtggtggtagctgcaaagaggtgatcgagtcccgagttacattttcagat
tatgatatggcaacttcaagtgtggatttaagaggttcccctttaagaaaaacagcaact
gctttaagtggaaatctgggatcgacatcaatgaacgatgtccacgaactactggagtgt
cccgtttgcgtaaatttgatgtatcctccaatttaccagtgtcccaatggccacactgta
tgttcaacttgcaagactagagttcacaactgttgcccgacttgtcgcaatgaactcgga
aatataaggtgtttggctctagagaaggtagccaagtcgctggaacttccttgcagttac
cagattctgggttgtcatgatatttttccatactacagcaagctcaagcacgaaaaaaac
tgcaggtatcgcccgtatagttgcccatatgccggagctgaatgctctgtcactggtgat
attccatttcttgtcatgcatctcaagaatgatcacagggtagacatgcatgacgggtgc
actttcaaccaccgatacgtcaaatccaatccccacgaagtggaaaatgccacgtggatg
ttaactgttttcaattgtttcggacgacagttttgcttgcactttgaggcatttcacata
ggaatggcaccggtttacatggcctttctgcggttcatgggtgacgaagacgaggcaaga
caatttagttatagtctggaagttgggggcagcggcaggaagtttatgtggcaaggggtg
cctagaagcatccgtgatagtcaccggaaagttcgagatagtcaagatggacttatcatt
caacggaacctggcactctacttctcaggtggtgatagacaggaactgaagctgaaagtg
gctggccgtatttggaaagaacaatga
DBGET
integrated database retrieval system
