Gossypium arboreum (tree cotton): 108487366
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Entry
108487366 CDS
T05776
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00900
Terpenoid backbone biosynthesis
gab01100
Metabolic pathways
gab01110
Biosynthesis of secondary metabolites
Module
gab_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
108487366
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gab01006
]
108487366
Enzymes [BR:
gab01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
108487366
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
108487366
2.5.1.29 geranylgeranyl diphosphate synthase
108487366
Prenyltransferases [BR:
gab01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
108487366
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
CIP2A_N
Motif
Other DBs
NCBI-GeneID:
108487366
NCBI-ProteinID:
XP_017647176
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All DBs
Position
10:complement(19930725..19932391)
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AA seq
372 aa
AA seq
DB search
MASVNLGSLVQSYSIFNQASRTNSKSFPLPRSFPFNPLKNISSSTPKRHSFTSLPSISSV
LTKEDAVMEEDQDPQLPSFDFKSFMVQKGNAVDQALDSAVPLRDPVKIHEAMRYSLLAGG
KRVRPVLCLASCDLVGGKESMAMPAACALEMIHTMSLVHDDLPCMDNDDLRRGKPTNHKV
YGEDIAVLAGDALLAFSFEHIAVSTVGVTPERIVRAIGELAKSIGTEGLAAGQVVDISSE
GLTDVGLDHLEFIHVHKTAALLEAAAVLGAILGGGRDEDVEKLRKFARNIGLLFQVVDDV
LDVTKSSKELGKTAGKDLVADKVTYPKLMGINKSKEFAEKLKSDALELLQGFDPEKSAPL
IALANYIAYRQN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagtgaatctgggttctttggttcaatcatactccattttcaaccaagcttcc
agaaccaattccaagtcttttcctttacccagatcctttcccttcaatcccctcaagaat
atctcatcttcaactcccaaaagacatagctttacatctcttccttcgatatcctcagtc
cttaccaaagaagacgcggtcatggaagaagaccaagaccctcaattaccaagttttgat
ttcaaatcattcatggtacagaagggtaatgcagttgaccaggccctggactcggctgtt
ccactccgtgaccctgttaaaatccatgaagcaatgcgttactcccttttagccggtggc
aaaagggtccgcccggttctttgtttggcttcctgtgaccttgttggtggcaaagaatcc
atggctatgccagcagcttgtgctcttgaaatgatccacaccatgtctttagtccacgat
gatcttccttgcatggacaacgatgatcttcgtagagggaaaccaactaaccacaaagtt
tatggtgaagatatagctgtgttagcaggggatgctcttttagccttttcgtttgaacat
atagctgtatccacagttggtgtcacacctgagaggattgtaagagcaattggggaatta
gctaaatctattgggactgaagggttggcggctggtcaagttgtggatataagcagtgag
ggtctaaccgatgtggggttggatcatttagaattcattcatgttcataaaactgctgct
ttgcttgaagcagctgcggttttaggggctattcttggtggtggacgtgatgaagatgtg
gaaaagttgaggaaatttgcaaggaatattgggcttttatttcaagttgtggatgatgtt
cttgatgtaacaaagtcatctaaagaattagggaagactgcagggaaagatttggtggct
gataaagtgacttatcctaaattgatggggataaacaaatcaaaggagtttgcagagaag
ttgaagagtgatgcattagagttgcttcaagggtttgatcctgagaaatctgccccctta
attgctttagctaattatatagcttacaggcaaaattag
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