Gossypium arboreum (tree cotton): 108487436
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Entry
108487436 CDS
T05776
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108487436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108487436
03036 Chromosome and associated proteins [BR:
gab03036
]
108487436
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108487436
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108487436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
108487436
NCBI-ProteinID:
XP_017647269
LinkDB
All DBs
Position
12:116937141..116941468
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AA seq
578 aa
AA seq
DB search
MFGATSQKVHPDNALFCAHLHPSLFLGRPTMQVAISLHLNLPLVVQPPFAFQTGSSIFGG
SSTEVFGAAQFSSPFLSTTAFGASSSPAFGSSMPAFGSSSSPAFGSSSASFGGSSVFGQK
PAFGFGSTPTQSSPFGITACIWFPDTISQSAFGSSTSAFAAASTPAFGVTSTPAFGSTGS
SAFGSTGTAFGVSNSPVFGTVGTFGASSAPAFGTSLTHAFGASNSAFGTSKTPVFGVSSS
AFGVSDTPSFGSSSTPSFSSGSSPAFGQSTPAFASSPFGTTTIGAQGSFGPRCSAPAFGQ
STFGAQRGGSRVASYPPTIDADSSIGTQPAEKLESISAMPVYKDKSHEELRWEDYQLGDK
VGLQPTARPPGGICFGVSTAPTSPCGSSPTFGQTSANPHSITSTNPFSLKSPSFSSVGFA
TSTTTSNPSQSTSSSLFDPISSTTSVFISPLTPTFGTGSSLFSSSVTPSFPSSPSIFGTA
AVPAAMPAFATGLNFSSSQASPLFNSTPAIGQVTSTFGQNTGSFDQTSILNTPSTGFCGN
MFSSPLLLAPANNPAAFGPATASRSGNLYYHSSFLSYL
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgcaactagccaaaaagtgcatcctgataatgctttgttctgtgcccatttg
catcccagtctgtttttggggagaccaacaatgcaagtagcaatcagtttgcacctaaac
cttcctttggtagtccaacccccttttgctttccaaacagggagttcaatatttgggggt
tcttctactgaagtgtttggtgcagcccagttttcttctccctttttgtcaaccacagcc
ttcggtgcctcttcatctccggcttttggaagttctatgcctgcttttggatcttcttct
tctcctgcttttggcagctcatcagcatcttttggtggatcttctgtttttggtcagaag
ccggcatttggctttgggtctactcccactcaatcaagtccttttggaatcacagcctgc
atttggttccccgataccatttcccagtctgcattcggttccagtacttctgccttcgct
gctgcaagcactcctgccttcggtgtcacaagcactcctgccttcggttcaactggaagt
tcagcatttgggagcactggaactgcatttggtgtgtctaattccccggtatttggaaca
gtaggcacatttggagcatcaagcgcaccagcttttggcacttctctcactcatgctttt
ggagcatcaaattctgcttttggcacttccaagactcctgtttttggagtgtcaagttct
gcttttggcgtttccgacactccttcttttggatcatcttctactccttcattcagctct
gggtctagccctgcttttggccaatcaacaccagcatttgccagtagtccttttggaaca
actacaattggagcacagggttcttttggaccccgatgttctgcaccagcatttggacag
tcaacttttggggctcaacgtgggggaagtagagttgcttcttacccacctacaattgac
gctgatagtagcattggtacacagcctgctgagaagttggagtcaatttcagctatgcct
gtttacaaagataaaagtcatgaggagctgagatgggaggattatcaattaggagataaa
gttggactgcagccaaccgcgcggccccctggagggatttgctttggtgtgtcaactgca
cctacaagtccttgtggttcttctccaacatttggccaaacatctgcaaatcctcattcc
atcacaagtaccaatccatttagtctaaaatctccatccttcagcagtgtaggctttgca
acctcgactactacctcaaacccttcccaatcaacatcatcaagcctttttgacccaatt
tcctcaacaacttcagtatttatttcacctttgactcctacatttggaactggttcatct
ctttttagttcatctgtcactccttcatttccatcttcaccatctatttttggtactgct
gcagttcctgcagcaatgccagcatttgctaccggtttaaattttagcagcagccaagca
tcccctttgttcaattctacccctgcaattgggcaggtgacctctacttttggacagaat
actggtagctttgaccaaacaagcattttaaacacaccttcaactgggttttgcgggaat
atgttttctagccctctactgttggctcctgctaacaacccagctgcctttggcccggca
actgcaagtcgctcaggaaatctttactatcattcttcctttttatcatacttatga
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