Gossypium arboreum (tree cotton): 108487933
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Entry
108487933 CDS
T05776
Name
(RefSeq) transcription factor PRE6-like
KO
K28364
atypical basic helix-loop-helix transcription factor protein
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gab03000
]
108487933
Transcription factors [BR:
gab03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
108487933
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Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_ILI
HLH
PMFBP1_N
Syntaxin_2
CENP-F_leu_zip
Allexi_40kDa
HAP1_N
VAB2
DUF1722
bHLH_IRO3
DUF4446
VPS51_Exo84_N
CRLF3_N
YwqH-like
NleF_casp_inhib
DUF948
Syntaxin
Swi5
BT4734-like_N
bHLH_NPAS4
FlxA
Motif
Other DBs
NCBI-GeneID:
108487933
NCBI-ProteinID:
XP_017647757
UniProt:
A0ABR0MD72
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Position
13:complement(20769242..20770284)
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AA seq
89 aa
AA seq
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MSGRRSGSGVSSISDDQITHLVSKLQQLIPELCARRSHKASASKVLQETCDYIRNLHKEV
EDLSDRLSQLLASIDTDKDQAAIVRSLLM
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcagaagatcaggttcaggtgtttccagcatcagcgatgatcaaatcacccat
cttgtatccaaattgcaacagcttatccctgagctttgtgcaaggcgctcccacaaggca
tcagcttccaaggtcttacaagagacttgcgattatataagaaacttacacaaagaggta
gaggacctaagcgaccgcttatcccagctgttagcttccatagacactgataaagaccaa
gcagccattgtcaggagtttacttatgtaa
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