Gossypium arboreum (tree cotton): 108488063
Help
Entry
108488063 CDS
T05776
Name
(RefSeq) casbene synthase, chloroplastic-like
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
108488063
Enzymes [BR:
gab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
108488063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Terpene_synth
Terpene_synth_C
Terpene_syn_C_2
Motif
Other DBs
NCBI-GeneID:
108488063
NCBI-ProteinID:
XP_052875864
LinkDB
All DBs
Position
10:complement(440313..443290)
Genome browser
AA seq
375 aa
AA seq
DB search
MAVQVQVQGSVLGNTNILLCLSKAPSPPFPMLIPLRLHKAKRCCFVAAHSTSSTKAEPLS
SNHRESGRPLVNFPPDIWGDRFLTLSFDISELDRCSTQVEVLKETVKDMLMASTTDPLQN
ILLINCLCRLGVSHHFEIEIEQQLTHCFDTLSQLIHNSDNNLHDIAIMFQVFRSHGYNIS
SNIFNKFKDGDGEFKISDTKGMISLYEASQFRINGELILDEACTFTTSQLKSMVSQTSTH
YAQYIENALYCPYQRGVPRLEARQYICFYEKDDDEARNETLLKFAKHDFNRIQMMLQQEL
SNLCSEWKEENMESRLPYARNRIVECFFSAIAIYFEPCYARACNIYAKLLTLVLIDDTYD
AYNTYEELQYFTDVI
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggcagtccaagtccaagtccaaggcagtgttttgggcaacaccaacatcctcctttgc
ctctctaaggctccctctccaccattcccaatgcttattcccctacgcctgcacaaggcc
aagaggtgctgctttgttgcagctcattccacaagctccacaaaggctgagccattaagc
agtaaccatcgagaaagtggtcgtccgttggtcaactttcccccagacatatggggtgat
cgtttccttactctttcctttgatatctcggaacttgatcggtgctcaacacaagttgaa
gtgttgaaagaaacggtgaaagatatgttaatggcttctacaactgatcctttacaaaat
attcttttgataaattgcttatgtcgcctaggagtttcccatcacttcgagatcgaaata
gagcaacaattaactcactgttttgatacattaagccaactcattcataatagtgataat
aatttgcacgatatcgcgattatgtttcaagttttcagatctcatggttataatatatct
tcaaatattttcaacaagttcaaggatggggatggtgagttcaaaattagtgatacaaaa
gggatgataagtttatacgaagcttcccaatttagaataaatggcgaactcattcttgat
gaagcttgtactttcacaacatcgcaattgaaatctatggtgagccaaacaagtacacac
tatgcccaatacatcgaaaatgccctctattgtccctaccaaagaggggttccaagacta
gaagcaaggcaatatatatgtttttacgaaaaagatgatgatgaagcaaggaatgagaca
ttactaaagtttgccaagcatgatttcaaccggatccaaatgatgcttcaacaggaacta
agcaacctttgtagtgagtggaaagaagaaaatatggaatcaaggcttccatatgcaaga
aatagaatcgtggagtgctttttctcggcaatagcgatttattttgaaccatgttatgca
cgtgcttgcaacatatatgctaaactactaactttagtactcattgatgatacttatgat
gcgtataatacctatgaagaactccaatatttcaccgatgtaatctaa
DBGET
integrated database retrieval system
