Gossypium arboreum (tree cotton): 108488117
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Entry
108488117 CDS
T05776
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic isoform X1
KO
K02945
small subunit ribosomal protein S1
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
108488117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
gab03011
]
108488117
Ribosome [BR:
gab03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
108488117
Bacteria
108488117
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
108488117
NCBI-ProteinID:
XP_017647911
UniProt:
A0A0B0PUJ8
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Position
3:127732374..127737416
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AA seq
550 aa
AA seq
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MSRVSKTLLADREVTKENRTKQREKKSSRGASRIRRMQTLLQPCKSLSFLNFSSQYFAFN
GAPKWQYSVKRTCNSITAAGTPKALSFPRKYTFLRSTQIVLCSQNDTFDEFSSTQLPERF
ENDSGIEENEELELLNKPSPAPVNNGFVSDVDKESEKPDKEEVLEPFLKFFRPSEPLQVE
GRGELEDSEEKIDEVKKVGVEYYEPKPGDLVVGVVVSGNENKLDVNVGADMLGTMLTKDV
LPLYDKEMDYLMCDLENKAEEFMFYGKMGIVKDDDAMSGGPGPGRPVVETGTVLFAEVLG
RTLSGRPLLSTRQLFRRIAWHRVRQIKHLNEPIEVKFTEWNTGGLLTRIEGLRAFLPKAE
LMKRVNNFSELKGYVGRRMHVKVSRINEANNDLILSEREAWEMMHLRDGTLVEGTVVKIL
PYGAQVRIADSNRSGLLHISNMSKTRITSVAELLKEDEKVKVLVVKSLFPDKISLSTAEL
ESEPGLFILNKERVFSEAEEMAKKYRQSLPAVYAPRNTEPLPADALSFENEESLYANWKW
FKFERENESS
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgagtttccaaaactttgctggcagatagagaagttacaaaagaaaatcgaaca
aagcagagagagaaaaagagctcacgaggtgcaagcaggataaggaggatgcaaaccctg
cttcaaccctgtaagtctttatcctttctcaatttttcgagtcaatactttgcttttaat
ggtgcccccaaatggcagtactctgttaaaagaacttgtaactccattaccgctgctggg
acaccaaaagctttgtcttttccgaggaaatatacgtttttgagaagtacccagattgtg
ctttgctctcaaaatgatacttttgatgagttttcaagcacccagttgcctgaaaggttt
gaaaacgatagtggaattgaagaaaatgaggagcttgaattgcttaataagcctagtcca
gcacctgtgaataatgggtttgtatctgatgttgataaagagtctgaaaaacctgataaa
gaagaggttttggagccttttttgaaattttttaggcctagcgaaccattgcaagtagaa
gggagaggtgaattagaagattctgaggagaaaattgatgaagtgaagaaggttggtgtc
gagtactatgagccaaaacctggtgacttagtggttggtgttgttgtttctggtaatgag
aataagcttgatgtgaatgttggggctgacatgttgggtacaatgttgactaaagatgtg
ttgcctttgtatgataaagagatggattatttgatgtgtgatctggaaaataaagctgag
gaatttatgttttatgggaagatgggaattgttaaggatgatgatgcgatgagtgggggg
ccgggtcctggaagaccagtggttgagactggaactgtgctttttgctgaggttcttgga
agaacacttagtggtcggcctttgctctcaactagacagctcttcaggaggattgcttgg
catcgagtgaggcagataaaacacctgaatgaacctatagaggttaaatttacagagtgg
aatacaggtggcctgctgacaagaattgagggcttgcgagctttccttccaaaagctgag
ttgatgaagagagtaaataacttctctgagttgaaaggatatgtgggccgcagaatgcat
gtgaaagttagtcgaataaatgaggctaacaatgatttaatattgagcgagagagaagct
tgggaaatgatgcatcttcgagatggaacacttgtagaaggaactgttgtaaaaatttta
ccgtatggagcccaagtaagaatagcggattccaatagaagtgggttgcttcatatctca
aatatgagcaaaactcgaattacttctgttgctgaattgcttaaagaggatgagaaggtc
aaggttcttgttgtgaagtcactctttcctgacaaaatatctctcagtactgctgaactt
gaaagtgaacctggcctctttatattaaacaaagagagggtattttctgaggctgaagag
atggcaaagaagtacaggcaaagtctacctgcagtttatgcaccccggaataccgaacct
cttccagctgatgctttatcttttgagaacgaagaaagtctgtatgcaaattggaagtgg
ttcaaatttgaaagagagaatgaatcaagttga
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