Gossypium arboreum (tree cotton): 108488340
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Entry
108488340 CDS
T05776
Name
(RefSeq) coatomer subunit beta'-2-like
KO
K17302
coatomer subunit beta'
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108488340
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gab04147
]
108488340
Membrane trafficking [BR:
gab04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
108488340
Exosome [BR:
gab04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108488340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_IFT140_1st
NBCH_WD40
PEP5_VPS11_N
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_WDR75_2nd
Beta-prop_DCAF4
WD40_like
Beta-prop_Nup120_160
Beta-prop_Vps41
WD_LRWD1
Beta-prop_DCAF12
HEAT_GCN1
TPR_CcmH_CycH
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
108488340
NCBI-ProteinID:
XP_017648115
LinkDB
All DBs
Position
10:9596714..9607463
Genome browser
AA seq
911 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV
RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWDKGWVCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPD
VPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKGSRRIVIGYDEGTIMVKIG
REVPVASMDNSGKIIWAKQNEIQTVNIKSVGADFEGSDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALECVWSADGEYAVRESTSKIKIFSKSFQ
EKRSVRPTFSAERIFGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAI
ASETSFYILKYNRDVVQSYLDSGRPVDEEGVEDAFELLHETNERVRTGIWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM
RGELERANEILPSIPKEHHNSVAHFLESRGMVEDALEVATDPDYRFELAIQLGKLEIAKE
IAAEVQSESKWKQLGKLALSTGKLAMAEECMKHAMDLSGLLLLYSSLGDAEGLSRLASLS
KEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVTIWRKDLNK
VNPKAAESLADPGEYPNLFEDWELSLSVESKVAETRGVYPPASGYLNHADTSQMTLVEAF
RNMQVEDEEPLENGDLYHESAEPNGCNQISEQNGEEGSQEEAVVVDADSNDGAVLVNGNE
PEEEWVLTPDH
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcagactcgaaattaagaggaaacttgctcaaaggtcagagagagtaaaatcc
gtagatctccatccaacggaaccatggattctagcaagtttgtattctggaactgtgtgc
atctggaactatcagtcacagaccatggctaagtcatttgaagtcactgagttgccagtt
aggtcagccaagtttgttgcacgcaaacaatgggttgttgctggagctgatgacatgttt
attcgagtatacaattacaacacaatggataaggtcaaagtatttgaggcacacaccgat
tacattagatgtgtcgctgtccatcctactcttccttatgtgttgtcatcatctgatgat
atgctcataaagctttgggattgggataagggttgggtgtgtactcagatatttgaggga
cattcccattatgtcatgcaagtgacctttaatccgaaggacactaatacttttgctagt
gcatctcttgaccgtactataaagatttggaaccttggctcccctgacccaaattttact
ctggatgcccatcagaaaggtgtaaattgtgttgattactttacaggaggtgataagccc
tatctgatcactggttctgatgaccacactgctaaggtatgggactaccagacaaagagt
tgtgttcagacattggaaggccacacgcacaatgtttctgctgtttgtttccatcctgac
gttcccattattatcactggttctgaggatgggacagttcgtatctggcatgctactact
tataggctagaaaatacattgaattatggtcttgagagagtttgggcaatcggatatatg
aaaggttcacggaggattgtgattgggtatgacgaaggaactattatggtgaaaattggc
cgtgaagtccctgtagcaagtatggacaacagtgggaaaatcatatgggctaagcaaaat
gaaattcaaactgtgaatattaagagtgtaggagcagattttgagggttctgatggagaa
agattgcccttagctgttaaggaattggggacctgtgatctgtaccctcaaagcttaaag
cataacccaaatgggaggtttgttgttgtatgtggagatggtgagtacattatatatact
gctttggcttggagaaataggtcatttggttctgcattagaatgtgtttggtcagctgat
ggtgagtatgctgttagagaaagcacatcaaagattaagattttcagcaaaagtttccag
gaaaagaggagtgtccggccaaccttctctgctgagcgtatttttgggggtactctactg
gcaatgtgctccaatgattttatttgtttttacgattgggctgaatgcaggttgattcgt
cgaattgatgttactgtgaaaaatctctactgggctgatagtggtgacttggtggcaatc
gcgagtgagacatctttttatatcctgaagtacaatcgagatgtagttcaatcttacttg
gatagtggaagaccggttgatgaagaaggagttgaggatgcatttgaactacttcatgaa
accaatgaacgtgtcaggaccggcatttgggttggggactgtttcatttacaacaactct
tcttggaggcttaattactgtgtcggtggagaggtaacgacaatgtttcatttggatcgt
ccaatgtacttgttgggatatcttgcaagccaaagtcgggtatatctgatagacaaagag
ttcaatgttatgggatacacgttacttctcagcctgattgagtacaagactcttgtgatg
cgtggagagttggaaagggccaatgaaattttaccttctattcccaaagagcaccataat
agtgtggctcatttcctggaatcacgaggcatggtagaggatgcactagaagtagctaca
gaccctgattacagatttgagcttgccatacagcttggtaaactagagattgctaaggaa
attgccgcagaagttcagagtgagtctaaatggaaacagttgggaaaattggctttgtcc
actggaaagctagcaatggctgaggaatgcatgaagcatgcaatggacctgagtggctta
ttgctcctttattcctctttgggagatgcagaaggattatcaagactggcatccctttcc
aaagagcaggggaagaacaatgttgctttcctttgtttattcatgttgggtaaattggag
gattgccttcagcttttagtggaaagcaatcggataccagaggctgctcttatggctcga
tcttatcttccaagcaaggtttcagagatagtgacaatttggagaaaagacctcaacaag
gttaatcccaaagctgctgaatctttggccgatcctggagagtatcctaacttgtttgag
gattgggagctttctctttctgttgagtctaaagtggcagaaacaaggggtgtttatcct
cctgcatcgggctatttgaaccatgctgatacatcgcagatgacacttgtggaagctttc
agaaacatgcaagtagaggatgaggagccacttgaaaatggtgatctttatcatgagtct
gcagaaccaaatggatgtaatcagatttcagagcagaatggagaagagggtagccaagag
gaggctgttgttgtggatgctgattctaatgatggagcagtacttgtcaatggtaacgag
cctgaagaagagtgggtgctaacaccagaccactag
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