Gossypium arboreum (tree cotton): 108488540
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Entry
108488540 CDS
T05776
Name
(RefSeq) general transcription factor IIF subunit 2
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108488540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gab03021
]
108488540
Transcription machinery [BR:
gab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
108488540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
Motif
Other DBs
NCBI-GeneID:
108488540
NCBI-ProteinID:
XP_017648310
UniProt:
A0A0B0N0K3
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All DBs
Position
9:complement(91505755..91511406)
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AA seq
262 aa
AA seq
DB search
MENKDNYLETSKAERSVWLMKCPGLVSRSLKAPQLSSSSSTSSASPSQAVAKVILSIDPR
VSSDDNDSSSPQFTMELVGTETGDVPKRYSMDMTKDFVPMSVFSETSQGKLAVEGKILNK
FDMRPHDENIENYGKLCRERTNQSMNKSRQIQVIDNDNGTHMRPMPGMIIAAVFNEKKKA
PAKTSDTKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDILKDLCIYNNK
GTNQGSYELKPEYKKATDGTNP
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaaggataactatcttgaaacaagcaaagctgaaaggtcggtgtggttaatg
aaatgccctggattagtttcacgctctctcaaagcccctcaactctcttcttcttcttct
acctcttctgcttctccttctcaagcggttgccaaagttattctatccattgacccccgt
gtttccagtgatgataatgactcctcttctcctcagttcaccatggaattggttggcaca
gaaaccggggatgtaccgaagcgctattccatggatatgaccaaagactttgttccaatg
tctgtgttttctgagacttcccaaggaaagcttgcggttgagggaaaaatactgaacaag
tttgacatgagacctcatgatgaaaacatcgaaaactatgggaaactttgccgtgaaagg
acaaatcaatctatgaacaaatccagacagatacaggtcatcgacaatgataatggaact
cacatgaggcctatgccagggatgattattgctgctgtattcaatgaaaagaagaaggcg
cctgccaagacatctgatacaaaaagaacaaggagggatcgtggggagatggaagatatt
atgtttaagctctttgaaaggcaatcgaattggactttaagacaactgattcaagagaca
gaccaacctgaacaatttctgaaagatatacttaaagacctgtgtatatacaacaacaag
ggaactaatcaaggatcgtatgagctgaaacctgaatacaagaaagcaaccgatggtact
aatccttaa
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