KEGG   Gossypium arboreum (tree cotton): 108488807
Entry
108488807         CDS       T05776                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab00040  Pentose and glucuronate interconversions
gab01100  Metabolic pathways
Module
gab_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:gab00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    108488807
Enzymes [BR:gab01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     108488807
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim
Other DBs
NCBI-GeneID: 108488807
NCBI-ProteinID: XP_017648586
LinkDB
Position
7:complement(91139283..91141077)
AA seq 420 aa
MALQFNFISSMLIILLLTISSAKAQEAGGVGGRGGGDSGVIDVVAKFGAKADERTDLSKP
LLDAWKEACASTSPAKIVIPKGTYFLSTATLDGPCKAPIELQVEGIVKAPADPGAFKEPK
WIAFNRIENFKLSGGGVFDGQGTIAYKREGCDKHNFCGSLPINLRFDFLTNAMIQGVTTK
DSKQFHVNVLGCKNITFEHFTVSAPGESPNTDGIHIGRSDGVNVLNTEIKTGDDCVSIGD
GSKNLVINGVTCGPGHGISIGSLGLFKNEEPVDGVTVKNCTLTNTSNGVRIKSWPGAEPG
TCSNIHFEDITVTNVSSPIIIDQKYCPWNKCKINEESKVKLSNISFKNIHGTSALPEAVK
IICSATLPCENVELIDIEITHSGPTGPAVSQCSNVKPKVSGKQNPTACSAPVPANPTPTS
NT seq 1263 nt   +upstreamnt  +downstreamnt
atggctcttcaatttaattttatttcgtccatgttaataatattacttttaaccatatca
tccgctaaagctcaagaagctggtggtgttggcggtagaggaggaggagatagtggcgtt
attgatgttgttgcaaagtttggtgcaaaggcagacgagagaacagatttgagtaagcca
ttgttggatgcttggaaagaagcatgtgcctcgacatctccggcaaaaattgtgattcct
aaagggacatattttttaagtacagctaccttagatggtccttgcaaggctcctattgag
cttcaagttgaaggcattgtgaaggctccagcagaccctggtgctttcaaggagcctaaa
tggattgccttcaatagaattgaaaatttcaaattgtctggcggaggagttttcgatggc
caaggaaccattgcttataaaagggaaggttgcgacaagcataatttttgtggttcactt
cctattaacctaaggtttgattttttaaccaacgcaatgatacaaggtgtaactaccaaa
gacagcaagcaattccacgttaatgttctaggatgcaaaaatattactttcgaacatttc
acagtatcagcacctggagaaagcccaaacacagatgggattcacatcgggagatcagat
ggggtcaatgttcttaacacggagataaaaactggtgatgattgtgtttcaattggggat
ggttccaaaaatttggttatcaatggagtaacttgtggaccaggacatggtatcagtatt
ggcagtctgggattgtttaaaaatgaagaacccgttgatggagttactgtaaaaaattgc
accttgactaatacttcaaatggtgttagaatcaaaagttggccaggtgctgaacccggt
acttgttcgaacattcactttgaggatattaccgtgaccaatgtcagttctcctattata
attgatcagaaatattgcccatggaacaaatgcaaaataaatgaagaatcaaaagttaaa
ctaagcaacattagtttcaaaaacattcatggcacttctgcgcttccagaagctgtcaag
attatttgcagcgctactttgccgtgtgaaaatgtggaactcatcgacattgaaattacg
cacagtggaccgactggacctgcagtatcacaatgttcaaatgtgaagcctaaagttagt
ggcaaacaaaatccaactgcatgttccgcccctgtcccagcaaaccctacccctacctct
taa

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