Gossypium arboreum (tree cotton): 108488829
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Entry
108488829 CDS
T05776
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00040
Pentose and glucuronate interconversions
gab01100
Metabolic pathways
Module
gab_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108488829
Enzymes [BR:
gab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
108488829
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
HI0933_like_1st
Motif
Other DBs
NCBI-GeneID:
108488829
NCBI-ProteinID:
XP_017648603
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Position
7:complement(91117476..91119124)
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AA seq
422 aa
AA seq
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MAIQFNFISSMLILLLLTRSFAKAREAGGGGGGSGGGGGGGVIDVVAKFGAKADEKTDLS
KPLLDAWKEACASTSPAKIVIPKGTYFLSTATLDGPCKAPIELQVEGTMKAPADPGAFKE
PKWIAFNRIENFKLSGGGVFDGQGTTAYKREGCDKHNFCGSLPINLRFDFLTNAMIQGIT
TKDSKQFHVNVLGCKNITFEHFTVSAPGESPNTDGIHIGRSDGVNVLNTEIKTGDDCVSI
GDGSKNLVINGVTCGPGHGISIGSLGLFKNEEPVDGVIVKNCTLTNTSNGVRIKSWPGAE
PGTCSNIHFEDITVTNVSSPIIIDQKYCPWNKCKINEESKVKLSNISFKNIHGTSALPEA
VKIICSATLPCENVELADIEITHNGLTGPAVSQCSNVKPKVSGKQNPAACSAPVPANPTP
TS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggctattcaatttaattttatttcatccatgttaatactattacttttaaccaggtca
tttgctaaagctcgagaagctggtggtggtggtggtggcagtggaggaggaggtggaggt
ggcgttattgatgttgttgcaaagtttggtgctaaggcagatgagaaaacagatttgagt
aagccattgttggatgcttggaaagaagcatgtgcctcgacatctccggcaaaaattgtg
attcctaaagggacatattttttaagtacagctaccttagatggtccttgcaaggctcct
attgagcttcaagttgaaggcactatgaaggctccggcagaccctggtgctttcaaggag
cctaaatggattgccttcaatagaattgaaaatttcaaattgtctggcggaggagttttc
gacggccaaggaaccactgcttataaaagggaaggttgcgacaagcataatttttgtggt
tcacttcctattaacctaaggtttgattttttaaccaacgcaatgatacaaggtataact
accaaagacagcaagcaattccacgttaatgttctaggatgcaaaaacattactttcgaa
catttcaccgtatcagcacctggagaaagcccaaacacagatgggattcacatcgggaga
tcagatggggtcaatgttcttaacacggagataaaaactggtgatgattgtgtttcaatt
ggggatggttccaaaaatttggttatcaatggagtaacttgtggaccaggacatggtatc
agtattggcagtctaggattgtttaaaaatgaagaacccgttgatggagttattgtaaaa
aattgcaccttgactaatacttcaaatggtgttagaatcaaaagttggccaggcgctgaa
cccggcacttgttcgaacattcactttgaggatattacagtgaccaatgtcagttctcct
attataattgatcagaaatattgcccatggaacaaatgcaaaataaatgaagaatcaaaa
gttaaactaagcaacattagtttcaaaaacattcatggcacttctgcgcttccagaagct
gtcaagattatttgcagcgctactttgccgtgtgaaaatgtagaactcgccgacattgaa
attacacacaatggactgactggacctgcagtatcacaatgttcgaatgtgaaacctaaa
gttagtggcaaacaaaatccagctgcatgttccgcccctgtcccagcaaaccctaccccc
acctcttaa
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