Gossypium arboreum (tree cotton): 108488901
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Entry
108488901 CDS
T05776
Name
(RefSeq) RING-H2 finger protein ATL74-like isoform X2
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108488901
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108488901
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
108488901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
FANCL_C
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-RING_4
zf-C3HC4_3
Prok-RING_1
Zn_ribbon_TFIIB
zf-Nse
Zn_Ribbon_TF
zf-RING-like
zf_RING_Vps8_fungal
zf-AtTam37
HemY_N
Motif
Other DBs
NCBI-GeneID:
108488901
NCBI-ProteinID:
XP_017648665
LinkDB
All DBs
Position
10:complement(29405239..29406810)
Genome browser
AA seq
196 aa
AA seq
DB search
MLSASVNMHRRLLGTEVSLPPENGNKTHDSYLSETNFDTNLVVILAALLCALICAVGLNS
IVRCALRCSRRFSTETPEQAAARLATTGLKKRDLRQIPVAVYGEGVSLPSMECPICLGEF
VDGEKVRVLPKCNHGFHVRCIDTWLLSHSSCPNCRHSLLEVDASKTETSQQVTSLRQSQN
GLGGDHPNGSVVVVVG
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgttatcagcaagtgtgaatatgcatcgacgcctgcttgggacagaagtgagcttgcca
ccggaaaatgggaacaaaactcatgattcctaccttagcgagacaaatttcgataccaac
ttggtggttatattggcagctcttttatgcgctctgatctgtgcagtggggttgaactct
atagtccgttgcgctctacgttgcagccgaaggttttcgacggagaccccagaacaagca
gctgctcgcttggcgacaacgggcctgaagaaacgagatttgagacaaatcccggtggca
gtgtatggggaaggagtgagtttgccgtcgatggaatgcccaatatgcctgggagagttc
gttgatggagaaaaagtaagagtgctgccaaaatgcaaccatgggtttcatgtgaggtgc
attgatacatggctgctctcacactcatcttgcccgaattgtcggcactcgttacttgaa
gtcgatgcatcaaaaaccgagacatcccagcaagtcacttccctacgtcaatcacagaat
ggattaggtggtgatcatccaaacggcagcgtcgttgtcgttgttggatag
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