KEGG   Gossypium arboreum (tree cotton): 108489063
Entry
108489063         CDS       T05776                                 
Name
(RefSeq) lysine-specific demethylase JMJ18-like isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
gab  Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:gab00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:gab01009]
    108489063
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gab03036]
    108489063
Enzymes [BR:gab01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     108489063
Protein phosphatases and associated proteins [BR:gab01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108489063
Chromosome and associated proteins [BR:gab03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    108489063
SSDB
Motif
Pfam: JmjC FYRC JmjN zf-C5HC2 FYRN KDM5_C-hel
Other DBs
NCBI-GeneID: 108489063
NCBI-ProteinID: XP_017648805
LinkDB
Position
10:429922..437628
AA seq 1061 aa
MEQLKIATNSYMKEDHSSQLSMKRDNNIESLGSPRHRRVSARWDPDEPCRPNIDDAPVFY
PTIEEFEDTLAYIEKIRAEAQSFGICRIVPPPSWTPPCPLKEKDIWEHAKFSTRIQQVDL
LQNREPMRKKNRSRKRKRRRHSRMGATRRRANSSSESVVTSETDEKFGFNSGSDFTLEEF
QRYADEFKEMYFERDCSEDLESSMIECRQWEPSWEDIEGEYWRIVEQPKDEVEVYYGADL
ETGTFGSGFPKVSSVLTGNDADKYATSGWNLNNFPRLQGSVLSFEGCDISGVLVPWLYVG
MCFSSFCWHVEDHHLYSLNYMHFGDPKIWYGVPGNQATSLEAAMRKHLPDLFEEQPDLLN
ELVTQLSPSVLKAEGVPVYRAVQHSGEFVLTFPRAYHAGFNCGFNCAEAVNVAPVDWLEH
GQLAVELYSEQHRKTSLSHDKLLLGSARQAIQALRELHVLGRETPGNSRWKRVCGKDGML
TKAVRMRKQMEEERVNCLPPDMPVRKMEKDFDLESERECFSCFYDLHLSACSCKCSPERF
ACLKHVKNFCSCQDEDKFVLLRYTVDELQMLVEALEGGLDAVKLWASKDLGLVSGIDCDA
YLSKWVQDSEVLKFEPAQPRESFSCSSRVEEKVDINTPYLYGHFSSEVSPSERQPATKLK
ASHVTLDSHNNVVNVGVLVMENRTNSEQDACIDLNLDIISDYPATARKSICDSDSSTNHS
VTDVEIFLREKSCGFDEVREPVLKRLKSDCSSSVSREYSEKYQHSISTGHDGFEGKKLFG
VELQFPHINAGQSNTLLKAETLNCSDVIASMAHQGHPLLNRAVEPLNFGSVIFGKLWCNS
QAIFPKGFRSRVKYFSVLDPTKISSYISEVLDIGLLGPLFKVTLEGCPTTTFSNVLPNKC
WEMVLQQLNQEILRRKNLGESGLLPLQSLQSINGLEMFGFLSPPIIQAIEALDPNHQCSE
YWNHKTACVNNEVKKYALGLSCSVGESKAKIFGVDLTKQDHEDPNQHSVDEEIQVFLRGL
FKKASPEELKIMRRILCSDSRSPERRMAYETLMEEIRKTCQ
NT seq 3186 nt   +upstreamnt  +downstreamnt
atggaacagttgaaaattgcaacaaattcttatatgaaagaggatcattcttcacaactt
tccatgaaaagagataataatattgagtctttgggcagtcctcgacatcgaagggtgtca
gcaagatgggatccagatgaaccatgccggcctaacattgatgatgccccagtgttttat
ccaactattgaggagtttgaagacacacttgcctacatagaaaaaattcgtgctgaagct
caatcatttggtatatgtcggattgttccgccaccatcttggactccaccttgtcctctt
aaagagaaagatatatgggaacatgctaaattttctacaagaattcagcaagttgattta
cttcaaaatagggagccaatgagaaagaaaaatagaagccggaaacggaaacggaggagg
cattcaagaatgggagctactagaagacgagccaattctagttcagaatctgttgttact
tctgagactgatgagaagtttggctttaattcaggatcagacttcactcttgaagaattt
cagagatatgcagatgaatttaaggagatgtactttgaaagggactgtagtgaggattta
gagtccagtatgattgaatgtaggcaatgggaaccgtcttgggaggacatagagggtgaa
tactggaggatagttgagcagccaaaagatgaggttgaggtatattatggagctgacttg
gaaacaggaacatttggcagtggctttcctaaggtgtcttctgtgttaactggaaatgat
gcagataaatatgcaacgtcaggttggaacctaaataatttcccacgcctacaaggttca
gtgttatcttttgaaggatgcgatatatctggagttctagtgccatggctctatgtgggg
atgtgcttctcatcattttgttggcacgttgaggaccaccatctatattcgctaaactat
atgcactttggtgatccaaaaatatggtatggagtgccggggaaccaggctacctccttg
gaggctgcaatgagaaagcatctgcctgatttgtttgaagaacaacctgacctactcaat
gaattggtcactcaactgtctccttcagttctgaaagctgagggtgtaccagtgtatcgg
gccgtacaacattctggggagtttgttcttacctttccaagagcgtatcatgctggattt
aattgtggtttcaactgtgctgaggcagtgaatgttgctcctgttgattggctagaacat
ggtcaacttgcagttgagctctacagtgagcagcatcgcaagacatcactgtcccatgac
aagctactcctgggatcagctcggcaagccatccaagctctcagggagttacatgttctt
ggcagagaaacgccaggaaattcgaggtggaaacgtgtatgcgggaaggatgggatgctt
acgaaggcagttaggatgagaaagcagatggaagaggaacgagtaaattgccttccccct
gatatgcctgtacgaaagatggaaaaagactttgatttggaaagtgagagggaatgtttc
tcttgtttctatgacttgcatctatctgcctgcagctgcaaatgctctcctgaacgattt
gcttgtcttaaacatgtaaagaatttctgctcatgccaagacgaagacaagtttgtcctc
cttcgctacaccgttgatgaattgcaaatgctagttgaagccctagagggaggattagat
gctgttaaactatgggcatccaaagatctcgggttggtttcaggtattgattgtgatgct
tatttgtctaagtgggttcaggacagtgaggtattaaaatttgagcctgctcaaccaagg
gaaagtttctcttgttcctcaagagtggaagaaaaggtagatattaatactccttacttg
tatggtcatttttcttcggaggtctcaccatcagagcgccagcctgcgactaaattaaaa
gcctctcatgtcaccttggatagtcataataacgtcgtaaatgttggagttcttgtcatg
gaaaacagaacgaactcggagcaggatgcctgcattgacttaaatcttgatattatatct
gattatcctgcaactgcaaggaagtctatttgtgattctgatagctccactaaccacagt
gtaactgatgttgagatatttttgcgagagaaaagttgtggatttgatgaagtaagagaa
cctgttctaaagagactcaagagtgactgtagctcatcagtttctcgagaatattccgag
aagtatcagcattcaatttcaacaggtcatgacggctttgagggcaagaaattgttcggc
gttgaacttcagtttccacatatcaatgcaggacaatcaaataccttgttgaaggcagaa
actctcaactgctcagatgtaattgcgtctatggctcaccaaggtcatccattgttgaat
cgtgctgttgagcctttaaattttggatccgtaatttttggaaaactatggtgcaacagc
caggccatattcccaaaaggttttagaagccgtgtcaagtactttagtgtgctcgaccca
acaaagatttctagttacatttctgaagtcttggatattgggctacttggacctctattt
aaggttactttagaaggctgccctaccacaaccttctcgaatgtgttgcctaacaaatgt
tgggaaatggtgctacagcagttaaatcaagaaatcttgaggaggaaaaacctaggagaa
agtgggctcctacctttgcaatctctgcagagcatcaacgggctcgaaatgtttggattt
ctctcaccacccataattcaggcaattgaagctctcgatcccaatcatcaatgttcggag
tactggaatcacaagactgcttgtgttaacaatgaagttaaaaagtatgcccttggattg
agttgctcggtaggtgaatcaaaagcaaaaatttttggtgttgatttgacaaagcaagat
catgaagatcccaatcaacattctgttgatgaagaaatacaggtattcctaagaggactt
ttcaagaaggcaagtcctgaagagttgaaaataatgcgcaggatactctgcagcgactca
cggagtcccgaacggcgaatggcatatgaaacattgatggaggagatccgtaaaacatgt
caataa

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