KEGG   Gossypium arboreum (tree cotton): 108489158
Entry
108489158         CDS       T05776                                 
Name
(RefSeq) lysine-specific demethylase JMJ28 isoform X1
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
gab  Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:gab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gab03036]
    108489158
Enzymes [BR:gab01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     108489158
Chromosome and associated proteins [BR:gab03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    108489158
SSDB
Motif
Pfam: WRC JmjC zf-4CXXC_R1 Cwf_Cwc_15
Other DBs
NCBI-GeneID: 108489158
NCBI-ProteinID: XP_017648969
LinkDB
Position
10:complement(2007538..2013925)
AA seq 1044 aa
MGMEGEGAIPDHLRCNRTDGRQWRCKRRVMEGKKLCELHHIQGRHRQNKQKVPESLKMQR
KKRKKKVFEKNKLEIRAKLLKLARPVKRKRVIGGESEALDEAVRKMKLKRGDLPLELIRM
VLKREAEKKKKKRKESECSDFDDDDDDDDDDDDDEKGDLMRELPNGLMAISSSSPHFDNA
GSCSGSGSASGSGSVSGSCINVKVGETDNNAVAITRRRFRSKNIEPLPVGTLQVLPYKKN
GANLRRGRRIRCHWCRKGGAPNLIKCSSCKQQFFCLDCIKEHYFFKREEVQVACPVCRGT
CGCRACLVSQHRDDECKGFLRDKIKVDKVLDFHYLICMLLPVFKQINQDQSVEIDVEAKI
QGKKLCDIQVQPAESGGNKEYCCSYCKTFILDFHRSCPKCSYSLCLSCCRDIFQGNLFGT
IKEVNCKCPKRRKTCLPGICLSDRKSVRITRQISDSRYSDSSVSLPSQKAPDGSVPISCP
PSEFGGCGDGLLDLRCILLQSWFKELEVSAEEIVGSYELPEAFDTFSCCSLCPATDDEAK
RVKQLQEASRRENSNDNFLFYPTILNIHGDNLEHFQKHWCKGHPVIFRNVLRTTALSWDP
IFLFCSYLKNSVAKAENEEPSKATSCSDWFEVEIGIKQLFLGSLRGLAQSSMCDEKLKLK
GWLSSPLFQEQFPDHYSEIIQSLPLREYMNPGSGILNIAARLPQEITKPDLGPSVSISYC
SGEELAQANSVTNLCYGLCDMVNVLAHATDAPVCMKQLNKIRKLMKKKKFQDERELAKTH
LDQKMANEVKEKPQSNGENIKVGSNGMINKEMHSRNTVPKLSRSPSAVHDAHDKEDSSDC
DSDSDSDCNSNSEATLHPCDTIHGSEALEDQEIFGKRTDLAKSCGAEWDVFRRQDVPKLM
EYLRKHSNEFGHTCGFRKHVVHPILDQSFFLDTSHKRRLKEEYEIEPWTFEQHVGEAVII
PAGCPYQIRNVKSCVNVVLDFVSPENVTECIRLINEFRLLPDDHKAKAKRFEVEKMALYR
ISTAIKEIRELICSEFRSSAELSE
NT seq 3135 nt   +upstreamnt  +downstreamnt
atgggaatggagggggaaggtgccataccggaccatctccggtgcaatcgaacagacggg
agacaatggcggtgtaagcgacgtgtaatggaagggaaaaagctctgtgagcttcaccat
atccaaggccgtcatcgacagaataaacagaaagtgccggaatccttgaaaatgcaaagg
aaaaagaggaaaaagaaggtttttgagaagaataagcttgaaattagggcaaagttgctg
aaattagcgaggccggtgaagaggaagcgagtgatcggaggggaatccgaggcgttagat
gaagctgttcgtaagatgaaactgaagagaggggatttgccattggagcttataaggatg
gttttgaaaagagaagctgagaagaagaaaaagaaaaggaaagaaagtgagtgtagtgat
tttgatgatgatgatgatgatgatgatgatgatgatgatgatgaaaagggtgacttgatg
agagaattgcctaatgggttaatggctatttcttcgtcaagtccacattttgataatgca
ggttcatgctctggttctggttcggcttccggttctggttctgtttcaggttcttgtatt
aatgttaaagtaggagaaactgataataatgctgttgccattaccagaaggcggtttcgg
tctaagaacattgagccattacctgttggtacattgcaggttctgccatacaagaagaat
ggagcaaatttgaggagagggagaagaataaggtgccattggtgtcgaaaaggcggtgct
cctaatttgatcaagtgttctagttgtaaacaacagttcttttgcttggattgcataaaa
gaacactatttttttaagcgagaagaagttcaggtagcttgtccggtatgccgtggaact
tgtggctgcagggcctgcttagtgagtcaacatagagacgatgaatgtaaggggtttcta
agggacaagatcaaagtagacaaggtgttagattttcattatttgatctgcatgctcctt
cctgtttttaagcaaataaaccaagaccagagtgttgagattgatgtggaggccaaaatc
caaggcaaaaaactgtgtgatattcaggttcaacctgctgaatctggtggcaataaggaa
tattgttgcagttattgcaagactttcattctggatttccatagaagctgcccaaagtgt
tcatatagcctctgcttaagttgttgtcgggatatctttcaagggaatttattcggaact
atcaaagaagttaactgcaaatgcccaaagagaaggaaaacttgtttgcccggtatttgc
ctttcagataggaaatctgtaagaataactaggcagatctctgacagtaggtattctgat
tcttctgtatcattgcctagtcagaaagctcctgatggcagtgttcctatctcatgccca
cctagtgagttcggtggttgtggtgatggccttcttgatctgagatgtattttgctgcaa
agttggttcaaggagctggaagtaagtgccgaagagatagttggcagctatgaattgccg
gaagcatttgatactttttcatgctgctccttatgtcctgcgacagatgatgaagccaaa
agggtgaagcagttgcaagaggcttctaggagagagaattcaaatgataacttcctattt
taccccactatattgaacattcatggtgataacctggagcacttccagaagcattggtgt
aaaggccatcctgtaatatttcggaatgttcttcggactactgctttaagttgggatcca
atattcttgttttgctcatatcttaagaatagtgttgccaaagctgagaatgaagagcca
agtaaagctacaagttgttcagactggttcgaggttgaaattggtattaagcagttattt
ttggggtcattaagggggctggcacaatctagtatgtgtgatgagaagctgaaactgaag
ggctggctttcttctcctttatttcaagaacaattcccggatcattattctgaaatcatt
caatctttaccacttcgagaatatatgaatcctggaagcggcattttgaacattgctgca
aggttgccacaagaaatcacaaagcctgacctaggtccatctgtctctatctcttattgc
agcggtgaggaacttgcacaagccaattccgtgacaaatttgtgttacggtttatgtgat
atggttaatgttttggcacatgctacagatgctcctgtttgcatgaagcaacttaataaa
ataagaaagttaatgaaaaagaaaaaatttcaagacgaaagggagcttgctaagactcac
cttgatcaaaagatggctaatgaagtgaaggaaaaacctcagtcaaatggtgaaaacata
aaagtaggatcgaatggtatgatcaataaagaaatgcattctcgtaacacagttccaaaa
ctttctcgatcaccttctgcagtgcatgatgcacatgataaggaagacagctctgactgt
gactctgattctgattccgactgtaattcaaattctgaagctacactacatccatgcgat
accattcacggctcagaagcattagaagatcaggaaatctttgggaaaagaacagatttg
gctaagtcttgcggtgcagaatgggatgtcttccgcagacaggatgttccaaagcttatg
gagtaccttagaaagcactcaaatgagtttggtcacacatgtggctttcgaaaacatgtg
gttcatccaatcctcgatcagagtttctttcttgatacaagtcacaaaaggaggctgaag
gaggagtatgaaattgagccctggacatttgaacaacatgttggagaagctgtaataatt
ccagctggctgtccataccagattagaaacgttaagtcctgtgttaatgtggttttggac
tttgtttcaccggaaaatgtgaccgagtgtatccggttgatcaatgaatttcgtctgctt
ccagacgatcataaagccaaagcaaaaaggtttgaggttgagaagatggccctgtatagg
attagtacagcaataaaagaaatccgcgagcttatatgttcagagtttaggtccagtgct
gagctcagtgagtag

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