Gossypium arboreum (tree cotton): 108489221
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Entry
108489221 CDS
T05776
Name
(RefSeq) solanesyl diphosphate synthase 3, chloroplastic/mitochondrial isoform X1
KO
K14066
geranyl diphosphate synthase [EC:
2.5.1.1
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00900
Terpenoid backbone biosynthesis
gab01100
Metabolic pathways
gab01110
Biosynthesis of secondary metabolites
Module
gab_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
108489221
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gab01006
]
108489221
Enzymes [BR:
gab01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
108489221
Prenyltransferases [BR:
gab01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
108489221
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
108489221
NCBI-ProteinID:
XP_017649085
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All DBs
Position
10:4319881..4324834
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AA seq
417 aa
AA seq
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MLFCRGFSRIRTTPGKSLFGFVLSRRTDPSLFLLSNQYVYSTIKVRSGRETLSWSFPSLL
GLGRQIHQSSSLIEEQLDPFSLVSDELSLVANRLRAMVIAEVPKLASAAEYFFKLGVEGK
RFRPTVLLLMATALNVHIPESVGGGVGDIVTTELRTRQQSIAEITEMIHVASLLHDDVLD
DADKRRGIGSLNAVMGNKLAVLAGDFLLSRACVALAALKNTEVVSLVATVVENLVMGETM
QMTTSSEQRCSMDYYMQKTYYKTASLISNSCKAIALLAGQTAEVAMLAFEYGKNLGLAFQ
LIDDVLDFTGTSASLGKGSLSDIQQGIVTAPILFAMEEFPQLHAIVYQGFDNPENIEIAL
EYLGKSHGIERTKELAMKHANLAAAAIDSLPESNDENVIRSRRALVDLTQRVITRNK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttgttttgccggggattttctaggattcgtacaactcccggaaagagcttgtttggt
ttcgttctctctcgtcgaactgacccttctctattccttctctctaatcaatatgtttac
tctactataaaggttcgtagtggcagagaaactctttcttggagttttccttcattgctt
ggtcttggacggcaaattcatcagagtagctctctaatagaggaacaacttgatccattt
tcacttgtttctgatgaactgtcacttgtcgctaacaggttgcgggctatggttattgct
gaggttcctaagcttgcttcagctgctgagtacttcttcaaattgggggtggaaggaaag
agatttcgtcccacggttttgcttttgatggctacagctttgaatgttcatatacctgaa
tcagttggtggtggtgtaggagatattgtgacaactgaattacgtacaagacagcagtct
atagctgagataacagagatgatccatgttgctagcctcctccatgatgatgttttggat
gatgcggataaaagacgtggtattggttcattgaatgctgtaatgggcaataagttggct
gtactagcgggagattttctgctttctcgagcttgtgtggcccttgctgctttaaaaaat
acggaggttgtatcattagtagcaacagttgtggagaatctggttatgggtgaaaccatg
caaatgacaacttcatctgaacaacgttgtagcatggactattacatgcaaaagacatac
tacaagactgcttccttgatttcaaacagttgcaaggcaattgcgcttcttgctgggcaa
acagctgaagttgcaatgttggctttcgagtatggcaaaaatctgggattggcatttcaa
ttgatagacgatgttcttgatttcaccggcacatcagcttcccttggaaagggttctcta
tctgacatccagcagggaattgtaacagctccaatcttgtttgccatggaagagtttcca
caattacatgctattgtttatcaaggttttgacaaccccgaaaacattgagattgccctt
gaataccttgggaagagtcatggtatagagaggacaaaagagctagccatgaagcatgct
aatcttgctgctgcagcaattgattctctaccggagagtaatgatgagaacgtaataagg
tcaaggcgggcactagttgatctcactcaaagagtaatcacaagaaacaagtga
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