Gossypium arboreum (tree cotton): 108489231
Help
Entry
108489231 CDS
T05776
Name
(RefSeq) neutral ceramidase 1-like isoform X1
KO
K12349
neutral ceramidase [EC:
3.5.1.23
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00600
Sphingolipid metabolism
gab01100
Metabolic pathways
Module
gab_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
108489231
Enzymes [BR:
gab01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.23 ceramidase
108489231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ceramidase_alk
Ceramidse_alk_C
Motif
Other DBs
NCBI-GeneID:
108489231
NCBI-ProteinID:
XP_017649099
LinkDB
All DBs
Position
5:complement(6828986..6833898)
Genome browser
AA seq
801 aa
AA seq
DB search
MRNASIQGHELSAAWCTYLCMMELLASIDCYFWSPSRTICLWMSLVLLLQYSKTVVSKSD
YLIGLGSYDITGPAADVNMMGYANAEQIASGIHFRLRARSFIVAEPQGKRVVFVNLDACM
ASQLVTIKVIERLKARYGELYTEQNVAISGIHTHAGPGGYLQYVVYLVTSLGFVRQSFDA
LVDGIEKSIMQAHENLRPGSIFVNKGELLDASVNRSPSAYLNNPASERRKHKYDVDKEMT
LLKFVDDQWGPVGSFNWFATHGTSMSRTNSLISGDNKGAAARFMEDWFEKNGIRSSDTNE
SGSDGVPRRVSNIIPNIHDDYNKLLELAASFRSSPGSPATQTMSVARRVRGALRQADKPR
FVSAFCQTNCGDVSPNVLGAFCTDTGLPCDFNHSTCGGKNELCYGRGPGYLDEFESTRII
GERQFRKAVDLFEKASEQLKGEVDYRHTYIDFSQLEVTLTKVGGGSEVVKTCPAAMGFAF
AAGTTDGPGAFDFKQGDDQGNPFWRLVRDVLKTPDKKQVDCQHPKPILLDTGEMKQPYDW
APSVLPIQILRIGQFVILSVPGEFTTMSGRRLRNAVKTVLTRSGNGEFGSNTHVVIAGLT
NTYSQYVATLEEYQVQRYEGASTLYGPHTLSAYIQEFQKLATALIKGQPVEAGMPPPDLL
QKQISLLTPVIMDSTPAGKNFGDVSSDVPANSTFKRGSTVTVVFWSACPRNDLLTEGTFA
LVEMLQGKDTWIPMYDDDDFCLRFKWSRPSKLSPRSKATIEWIIPSSSSPGVYRIRHFGA
SKGLMGSIRHFTGSSSAFVVA
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatgcttcgatccaggggcatgaactaagtgctgcttggtgtacttatctgtgt
atgatggagttacttgcttccatcgactgttacttttggagtccttcgagaactatttgc
ttatggatgtctctggtgcttttgctccaatatagtaaaacagtagtatccaaatccgac
tatttgatcggacttggaagctatgacattactggtcctgcagccgacgttaacatgatg
ggatatgctaatgcggaacaaattgcctcggggattcacttcaggctgcgagctcgctca
ttcattgtggctgagccacaggggaaacgagttgtatttgttaaccttgatgcttgcatg
gcttctcaattagtgacgatcaaagtgattgagagattgaaagcaagatatggggagtta
tatactgaacagaatgttgctatcagtggtattcatacccatgccggtccaggaggttat
ctccaatatgtagtgtatcttgtgacatctttaggatttgttcgtcagtcatttgatgcc
ctggtagatggcatcgagaaaagtatcatgcaagctcatgaaaatcttcgacccggatct
atttttgtgaacaagggagaactactagatgctagtgtaaaccgaagtcccagtgcctat
ctcaataaccctgcatccgaacggagaaaacataaatatgacgttgataaagaaatgacc
cttttaaagttcgtagacgaccagtggggtccagtgggtagtttcaactggttcgcaact
cacggaacatcgatgagtcgtacaaactcactgatcagtggggataacaaaggtgcagca
gctagatttatggaagactggtttgagaaaaatggcatcagaagttcagatactaatgaa
tcgggctctgacggagtacctcgaagagtctctaatatcatccccaacatccatgatgat
tacaataagttactggagcttgctgcatccttccgctcatctcctggtagcccagcaaca
caaactatgagtgttgccagacgcgtcagaggtgctcttagacaggctgataagcccaga
tttgtatctgcattttgccaaacaaattgtggtgatgttagtcccaatgtactcggagca
ttttgcaccgacaccggtcttccttgtgacttcaatcatagtacctgtggtggaaagaat
gagctgtgctatggccgaggaccaggctatcttgatgagtttgaaagtactcgtattatc
ggagagaggcaattcagaaaagccgtggacttgtttgagaaagcatctgaacagttaaaa
ggagaggttgattatcgtcacacttacatagacttttcccagcttgaggtaacacttact
aaagtgggaggaggttctgaggtagttaaaacttgtcccgctgcaatgggatttgcgttt
gctgcaggaacaactgatggacctggagcatttgattttaagcaaggagatgaccaggga
aaccctttttggaggcttgtccgtgacgtacttaaaactcccgataagaaacaagttgat
tgtcagcatccaaagcccatcttgctagatactggtgaaatgaagcaaccatatgattgg
gcgccttcagtacttccaatccagatccttcggatagggcagtttgtcattctcagtgta
ccaggagaatttacaacaatgtctgggaggcgtctccggaatgctgtgaagacagtgctt
acaaggagtggtaatggggaatttggtagtaacactcatgttgttatagctgggttgact
aatacatattcacagtatgttgcaactttagaagagtaccaagtgcagagatacgagggt
gcctccacactgtatggtccacacacactcagtgcctacattcaggaattccagaagctt
gcaactgctcttatcaaaggtcaacctgttgaagccgggatgccgcctccagatctccta
cagaagcaaataagcttactcactccagttataatggactcaacccctgctggtaaaaac
ttcggggatgtcagctccgatgttccagctaactcaaccttcaagagaggcagcaccgtg
accgttgttttctggtcagcttgcccccggaatgatctcttgacggaaggtactttcgcc
cttgttgagatgctccaagggaaggatacatggattccaatgtacgatgacgatgatttc
tgccttcgctttaaatggtcaagaccttcaaagctaagcccccggagtaaggcaacaatc
gaatggataatcccatcatcttcctcaccgggagtatacagaataagacatttcggtgct
tcaaaagggcttatgggatcaattcggcatttcactggttcatcaagtgcttttgtagtg
gcatga
DBGET
integrated database retrieval system
