Gossypium arboreum (tree cotton): 108489240
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Entry
108489240 CDS
T05776
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 41
KO
K19466
ATP-dependent RNA helicase DDX59 [EC:
5.6.2.7
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
108489240
Enzymes [BR:
gab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108489240
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GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-HIT
ResIII
Cytidylate_kin2
Motif
Other DBs
NCBI-GeneID:
108489240
NCBI-ProteinID:
XP_017649113
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Position
10:11924215..11928069
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AA seq
535 aa
AA seq
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MEDGNGNDPCESSVLQKDIYQGIDDDVKLNSKDQRDALADEPKCVICGRYGEYVCDETDD
DICSLECKQAILLRVANSLPVCSSSTQRLPATDECFYVRDSVDRSGSPSLTCDQAELLRN
KLEIHVKGGVIPAPVLAFSSCGLPQKLLQNIETAGYVMPTPVQMQVIPAALDGRSLLVSA
DTGSGKTASFLIPIISLCAKLYPNNNSNIRKPLAVVLTPTRELGIQVEDQAKLLGKGLPF
KTALVVGGDPIARQLYRIQQGVELIIGTPGRLIDILTKQDIELTDVKIFGLDEVDCMLQR
GFRDQVMQIFRALSQPQLLMYSATISQDVEKIASCMATDIVSVSIGKPSRPSRAVKQLAI
WVESKQKKQKLFDILRSKHFRPPAVVYVGSRAGADLLSDAITATTGIKALSIHGTKSMKE
RREIMRMFLVGEVSVVVSTGILGRGIDLLAVRQVIVFDMPNSIKEYVHQIGRASRLGEEG
NAIVFVNDEDKKLIPEFVDILKSSGAIIPRELGNSRYNVVSLPSGKNFKKRKYGG
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggaggatggaaatggaaatgatccttgtgaaagttcagtattacagaaagatatttat
caagggattgatgatgatgttaaactgaattctaaagatcagagagatgctctggcggat
gaacctaaatgtgttatttgcgggcgctatggcgagtatgtatgtgatgagacagatgat
gatatttgcagcttggaatgtaaacaagccatactcctcagggttgctaactcattgcca
gtttgctcatcatctactcagcgattacctgctactgatgaatgcttttatgttagagat
tctgttgataggtcaggctctccatctttaacttgtgatcaagctgaattgcttcgaaac
aaacttgaaattcatgtaaaaggaggtgtgattcctgctccagtattggcattttcttcc
tgtggtcttcctcagaagctcctacaaaatatagaaactgcagggtatgtcatgccaaca
ccggtccagatgcaagtaatcccagctgctttagatggacgaagccttcttgtttcagct
gacacaggctctgggaaaactgcttcctttcttattcctattatttctctttgtgcaaaa
ctttaccccaacaacaactcaaatatcagaaagccattagcggtggttctaacaccaact
agggaactaggtatccaagttgaggaccaagctaagttgcttggaaaaggtttgcctttc
aaaactgcacttgtggttggtggagatcccattgctagacaactctatcgcattcagcaa
ggagtggaactaattattggaacaccgggcaggcttattgatattttaaccaagcaagat
attgaactaactgacgtaaagatatttggtctggatgaagtagactgcatgcttcaaagg
ggcttccgggaccaggtgatgcagatttttagggctctgtcacaaccccagttactgatg
tattctgcaacaatttcacaagacgtggagaaaatagcaagttgtatggcaaccgatata
gttagtgtttctattggcaagcctagcaggccgagtagggctgtgaagcagctagccatc
tgggttgagtcaaaacaaaaaaagcaaaagctttttgacatattaaggagtaaacacttt
aggccacctgctgtggtgtatgtgggttccagagcaggggcagatctactgtctgatgca
attacagccaccactggaattaaagctttgtcaatacatgggacgaagtccatgaaggaa
aggagggaaataatgaggatgtttttagttggagaagtatcagtagttgtgtctactggg
attttgggtcgcggaattgatcttttagctgtgagacaggtgatagtgtttgatatgccc
aattccattaaggagtatgtgcatcagattggtagggcatcaagattaggggaggagggt
aatgcaattgtttttgtgaacgatgaggataagaaattgattccggagtttgtagatatt
ttaaaatcctctggagctattattcctcgagaacttggtaattcacggtataatgttgtt
tctttgccatcaggcaagaacttcaagaaaagaaaatatggtggctga
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