Gossypium arboreum (tree cotton): 108489253
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Entry
108489253 CDS
T05776
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6-like isoform X1
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108489253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108489253
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108489253
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
HECT type E3
108489253
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
108489253
NCBI-ProteinID:
XP_017649140
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All DBs
Position
10:112120505..112136322
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AA seq
1032 aa
AA seq
DB search
MFFTGDPTSRKRVDLGGRSSKERDRQKLLEQTRLERNRRLWLRRQNSAALTIQKYFRGRK
VVEAEHAKVREHFYQTYGKHCQNVDRHCFGPDSEFLRQLIFFFDAHNLNDFSVLVETCRL
IQNFVRDSGDTVGLFAGMDYSPSHSLVAYRLKRLSFACIQAIHQNRKQLKDQLLMAPEEA
TASTTILLQTLLLFLDPKLPWACKAVGYLMQRNVFSLFREVILMVKENISAGGSFGKIYT
LERVLALMISHVGQSTCICSNVDSQWSFSSQILTIPFIWQLFPYLKVVFASWRLTLHYTN
KMVLCVQNHASLLPTDISNKFPVYACLLGNILETAGAAFSQPDCSFEMAMDLAAVTTFLL
DALPPIKSSSRESPTVAEDDMIIGDEIEEIVLDSNLEQQITNAIDSRFLLQLTNVLFGGI
SAACDPHNEGPDDKEVAAITAACAFLHVTFNTLPLERIMTVLAYRTELVPVLWNFIKRCH
HNQKWSPLPERFSYLLGDAPGWLLPLAVFCPVYKHMLMIVDNEEFYEQEKPLSLKDVRCL
IVILRQALWQLLWVIPSVHPTYGKSISNTSAHKRQLVETIQNRVGTVVSELLSQLQDWNN
RRQFTPPSDFHADGVNDFFISQAAVEGSKAHDILKQAPFLIPFTSRVKIFTSQLASVRQR
HGAHGVFTRNRFRIRRDHILEDAYNQMSQLSEEDLRGLIRVTFVNEFGVEEAGIDGGGIF
KDFMENITRAAFDVQYGLFKGTADHLLYPNPGSGMIHEQHLQFFHFLGTLLAKAMFEGIL
VDMPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKHYKGDISGLELYFVIVNNEYGE
QTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLMQKDWIDMFN
EHELQLLISGSLDSLDVDDLRCHTNYAGGYHSEHYVIDMFWEVLKSFSLENQKKFLKFVT
GCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKLPPYRSKEQLEAKLM
YAINADAGFDLS
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcaccggtgatccgaccagtcggaagcgagttgatttgggtggtcggagctca
aaggagagagataggcagaaacttctagaacaaacgcgattggagcggaatcgccgcctc
tggttgcgtcgccagaattccgcagctctcacgattcagaaatacttcagagggagaaag
gttgtggaagctgaacatgccaaggtccgagagcacttctaccaaacctatggaaagcac
tgccaaaatgtagataggcattgttttggtccagactcagagtttctccgccagctaatt
ttcttctttgatgcccacaatttaaatgatttttcagttcttgttgagacttgccgatta
attcagaattttgttcgagatagcggggataccgttggactctttgcaggtatggactat
tcacccagtcattctttagttgcctacagactgaagcggctctcatttgcttgtattcag
gctatacatcagaacagaaaacaattgaaagatcaactgttgatggctcctgaggaggcc
actgcatcaacaaccatcttgcttcaaacattgcttttgtttttggatcctaaactgcct
tgggcatgtaaggcagttggttatctcatgcaaagaaatgtattctctctgtttagagaa
gttattctaatggtaaaggaaaatataagtgctggaggttcttttgggaaaatatataca
ttggagcgtgtgcttgctcttatgatttctcatgttggtcagagcacatgtatttgctca
aatgtggattcacagtggagtttctcatcccagattcttacaatccctttcatatggcaa
ctttttccatacttaaaagtggtttttgcttcttggagattaactctgcactacactaat
aagatggtcttgtgtgtgcaaaaccacgctagtttacttcccactgatatatcaaataag
tttcctgtttatgcctgcctccttggtaatattttagaaacagcaggtgctgctttttct
cagcctgactgctcatttgaaatggccatggaccttgcagctgttacaactttcttgttg
gatgctcttcctcctataaaatcatcaagcagagaaagtcctacagttgcagaggatgat
atgatcataggtgatgaaatagaggaaatagttttggatagtaatttggagcagcagata
actaatgctattgattcacgctttctgctgcaattgactaatgtgttgtttggagggatt
tccgctgcctgtgatccacataatgaaggaccagatgataaggaggtggcagccattact
gctgcttgtgcttttctgcatgttactttcaatactttacctctagagagaatcatgacc
gtactggcctatagaactgaacttgttccagtgctttggaattttattaagcgatgtcat
cataatcaaaagtggtcacccttgcctgagcgtttttcatatctcttgggagatgcacct
ggttggctgctacctctggctgttttctgtccagtgtataagcacatgcttatgatagtt
gataatgaggagttttatgagcaggagaagccattgtctttgaaggatgtcagatgccta
attgtcattctgagacaggcgttatggcagctcctatgggtgattccttctgttcaccct
acctatgggaaatctatctccaatacttctgctcataagaggcaacttgttgaaactatt
caaaatagggttggtactgtggtctcagagctcctatcccagttgcaagattggaataac
cggcggcaatttactccgcccagtgactttcatgctgatggtgtaaatgacttttttatt
tctcaggctgcggtggaaggcagcaaagcacatgacatattgaagcaagcaccttttttg
attccattcaccagcagagttaaaatattcacttctcaactagcatcagttaggcagaga
catggggctcatggagtttttaccaggaaccgattcagaattcgaagggatcatatttta
gaagatgcttataatcagatgagtcaattgtctgaggaggatcttagaggactgattcga
gtaacatttgtcaatgagtttggggtggaggaggctggcattgatggtggtggaattttc
aaagattttatggagaatattactcgggctgcatttgatgtgcaatatgggttatttaag
ggaacagctgatcacctcctatatccaaatcctggatctgggatgatacatgaacagcat
ctccaatttttccatttcttgggaacactacttgcaaaggccatgtttgaagggattctt
gtggatatgccatttgcgacattcttcttgagcaaattgaaacaaaagtacaattattta
aatgacttgccttctttggatccagaattatatcgccaccttattttcttaaagcattat
aaaggggacatatcagggttggagctctactttgtaattgtgaataatgaatatggcgaa
caaacagaagaagagctgcttccaggaggcaaaaacatacgtgttacaaatgagaatgtg
atcacatttattcaccttgtatctaaccaccgtttgaattttcagatacgtcagcaaagt
tctcatttccttaggggatttcagcagcttatgcagaaagattggattgatatgttcaat
gaacatgaattgcagcttctgatttcaggttcccttgatagcttggatgttgatgacctt
cgatgccacaccaattacgctggtggttatcatagcgagcattatgtcattgatatgttt
tgggaagtcctcaaaagcttttcactggaaaatcaaaagaaatttttgaagtttgtgact
gggtgttcccgaggacctttgctgggattcaaatatctcgaacctttattttgcatacaa
agagctgctggaagtgcctctgaagaagcattggaccgattaccaacatcagctacttgt
atgaaccttctaaagcttccaccatatagaagcaaagagcaactggaagccaaattgatg
tatgcaataaatgcagatgcgggttttgatttgagttga
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integrated database retrieval system
