Gossypium arboreum (tree cotton): 108489270
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Entry
108489270 CDS
T05776
Name
(RefSeq) LOW QUALITY PROTEIN: chaperonin 60 subunit beta 2, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108489270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108489270
03110 Chaperones and folding catalysts [BR:
gab03110
]
108489270
03029 Mitochondrial biogenesis [BR:
gab03029
]
108489270
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gab04147
]
108489270
Enzymes [BR:
gab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
108489270
Messenger RNA biogenesis [BR:
gab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
108489270
Chaperones and folding catalysts [BR:
gab03110
]
Heat shock proteins
HSP60 / Chaperonin
108489270
Mitochondrial biogenesis [BR:
gab03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
108489270
Exosome [BR:
gab04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108489270
Exosomal proteins of other body fluids (saliva and urine)
108489270
Exosomal proteins of breast cancer cells
108489270
Exosomal proteins of colorectal cancer cells
108489270
Exosomal proteins of bladder cancer cells
108489270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
108489270
NCBI-ProteinID:
XP_017649165
UniProt:
A0A0B0MFV6
LinkDB
All DBs
Position
10:complement(118462257..118466695)
Genome browser
AA seq
607 aa
AA seq
DB search
MASTFTAMSSVGSFVAPNGLVMDKKLPSSSNRLSSLASISSSSFVSRRNVVLRRSRLPKI
SAAKELHFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAK
EVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITR
GIEKTTRALVSELKAISKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGEXGVVTLEE
GKSAENSLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINILEE
AIRSGYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGT
VIRDEVGLSLDKASKEVLGHASKVVLTKDTTTIVGDGSTQEAVNKRVVQIKNLIEAAEQD
YEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTL
LRLASKVDAIKDSLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNPRH
GFNAATGNYEDLMSAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPETVPAGNPM
DNSGYGY
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcatccactttcacagccatgtcatcagttggctcattcgttgcacctaatggtcta
gtcatggataagaagcttccatcttcttccaacagattgtcatctttagcttccatttct
tcatcttcatttgttagtagacgaaatgttgttcttagaagatctcgtctgcccaagatt
tctgcagcaaaagagctacatttcaataaggacgggtcagctataaagaaattacaaact
ggtgtgaacaagcttgctgatttggttggagtcactcttggaccaaaaggtaggaatgtc
gttctagagagcaaatatggctctcccaaaatcgttaatgatggtgtgacagtggctaag
gaggttgagttggaggacccagttgagaacattggggctaagttagtaagacaggcagct
gctaaaactaatgacttggctggtgatggaacgacgacttccgttgttcttgcgcaaggt
ttgattgctgaaggtgtcaaggtggtggcagccggtgcaaatcctgttttgatcactagg
ggcattgagaagaccacaagggctttagtatctgagcttaaggctatttcaaaagaggtt
gaagacagtgaacttgctgatgttgctgctgttagtgctgggaacaactatgaagtagga
aatatgattgctgaggccatgagtaaagttggcgaanngggtgtagttacccttgaggag
ggaaaaagtgctgagaatagtctatatgttgttgaagggatgcaatttgaccgtggttat
atctcaccttactttgtcactgatagtgagaaaatggcagtagaatatgagaactgcaag
ttgctgctggttgataaaaaaattactaatgcaagggatcttatcaacatcctggaagaa
gccattaggagtggatacccaattttgataattgccgaagacattgaacaggaagcttta
gcaactctggttgtgaacaaacttagaggtgctttgaagattgctgctctcaaagctccc
ggctttggagaacgcaagagtcagtatctggatgacattgctatccttactggaggtact
gttattagagatgaggttgggctttccttggacaaagctagcaaagaagtcttgggtcat
gcctctaaagtggttcttaccaaggatacaaccaccatcgtgggtgatggaagcacccag
gaagcagtgaataaacgagttgtacagattaaaaatctcattgaggctgcagaacaggat
tatgagaaggaaaaacttaacgaaaggattgctaaattatctggtggtgtggcagtgata
caggttggagctcaaactgaaacagagcttaaagaaaagaaattgagagtagaagatgct
cttaatgcaactaaggcagcagttgaggaaggtattgttgtcggtggtggatgtactttg
ctaagacttgcttctaaggtggatgctatcaaggattcactcgataatgatgaagaaaag
gttggagcagatattgttaaacgagctttgagttaccctctaaaattgatagctaaaaat
gctggtgtaaatggaagtgtggtgagcgagaaggtgctctccaacgataaccctaggcat
ggattcaatgctgccactggaaattatgaggatcttatgtctgcaggaattatagatcca
accaaggtggtcagatgttgcttggagcatgctgcatcagtggccaagacattcttgatg
tccgattgtgtggttgtggaaataaaggaacccgagaccgtgcctgctgggaaccccatg
gataattcaggatacggctactaa
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