Gossypium arboreum (tree cotton): 108489329
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Entry
108489329 CDS
T05776
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108489329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108489329
03016 Transfer RNA biogenesis [BR:
gab03016
]
108489329
03012 Translation factors [BR:
gab03012
]
108489329
04131 Membrane trafficking [BR:
gab04131
]
108489329
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gab04147
]
108489329
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
108489329
Transfer RNA biogenesis [BR:
gab03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
108489329
Translation factors [BR:
gab03012
]
Eukaryotic type
Elongation factors
108489329
Membrane trafficking [BR:
gab04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
108489329
Exosome [BR:
gab04147
]
Exosomal proteins
Proteins found in most exosomes
108489329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FlpD
SRPRB
Semialdhyde_dhC
AAA_22
Motif
Other DBs
NCBI-GeneID:
108489329
NCBI-ProteinID:
XP_017649277
LinkDB
All DBs
Position
10:123136148..123138467
Genome browser
AA seq
449 aa
AA seq
DB search
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPEKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGTLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AELLTKIDRRSGKELEKEPKFLKNGDAGMIKMVPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPSGAKVTKSAAKKGGK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggagaaggttcacatcaacattgttgtcattggccatgtcgactctggaaag
tcaacaacaactggtcacttgatctacaagcttggaggtattgacaagcgtgtgatcgag
aggttcgagaaggaagctgctgagatgaacaaaaggtcattcaagtatgcctgggtgctc
gataagttgaaggctgagcgtgagcgtggtatcaccattgatattgccttgtggaagttt
gagacaaccaagtactactgcactgtcattgatgctcctggacatcgtgacttcattaag
aatatgattacgggtacttctcaagctgactgtgctgtccttatcattgactccacaact
ggaggttttgaagctggtatttccaaggatgggcagacccgtgagcatgctctccttgcc
ttcactcttggtgtcaagcaaatgatttgctgctgcaacaagatggatgccacaaccccc
aagtactcaaaggcaaggtatgatgaaattgttaaggaagtttcttcctacctgaagaag
gttggttacaaccctgagaagattccattcgtccccatatctggttttgagggtgacaac
atgattgagaggtccaccaacctcgattggtacaagggtccaaccctccttgaggctctt
gaccagatcaatgagcccaagagaccctctgacaagcccctccgtctcccacttcaggat
gtctacaagatcggtggtattggaactgtcccggtgggtcgtgttgaaaccggtaccctt
aagcctggaatggttgttacatttggaccttctggattgaccactgaagttaagtctgtt
gagatgcatcatgaagctcttcaagaggctcttcctggtgacaatgttgggttcaatgtg
aagaatgttgctgtcaaggatctcaagcgtggatatgttgcctccaactccaaggatgat
cctgccaaggaggcagccaacttcacctcccaagttatcattatgaaccatccaggacag
ataggaaatggttatgcacctgtcctcgattgccacacctcccacattgctgtcaagttt
gcagagctcttgaccaagattgacagacgatctggtaaggagctagagaaggagcctaag
ttcttgaagaatggtgatgccggtatgattaagatggttccgaccaagcccatggttgtg
gaaaccttctccgaataccctccacttggacgttttgccgttagggacatgagacagacc
gttgctgttggtgtgatcaagagtgtggagaagaaggacccatctggagccaaggtgacc
aagtctgccgccaagaagggtggcaagtga
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