Gossypium arboreum (tree cotton): 108489361 Help Entry 108489361         CDS       T05776                                  Name (RefSeq) E3 ubiquitin-protein ligase UPL4   KO K10590   E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26] Organism gab  Gossypium arboreum (tree cotton) Pathway gab04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:gab00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     108489361  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:gab04121]     108489361 Enzymes [BR:gab01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.26  HECT-type E3 ubiquitin transferase      108489361 Ubiquitin system [BR:gab04121]  Ubiquitin ligases (E3)   HECT type E3    108489361 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HECT Arm ARM_ARMC5 Motif Other DBs NCBI-GeneID:  108489361 NCBI-ProteinID:  XP_017649355 LinkDB All DBs Position 4:complement(101042836..101050901) Genome browser AA seq 1570 aa AA seqDB search MGSRGQKRTETADELPADKRACSSLDFRPSSSNCSSVRTHLNLPNSTPDADMETSSSTSA SSRSDGEHEKEDESAYGSCDSDDAEQQPRHHILRDYQRRRSSSDHGKLNTILSNLNEGNG GSGQLAALTELCEVLSFCNEDSLSSLMADSLSPVLVKLAKNESNANIMLLAIRGMTYLCD VYPRSSGFLVRHDAVPALCERLLAIEYVDVAEQCLQALEKISRDQPVACLQAGAIMAVLN FIDFFSISVQRVALATVVNICKKLPLEGPAPFVEAVPKLCDLLQHEDQQLVESVATCLIK ISERMCQSFELMEELCKHELINQVTLVMKSNSRTTISQPIYNGLIGLLVKLSSGSFVAFR SLYELNISNILKDVLSTYDLSHGISPPDLVDGNCNQVHEVLKLLNELLPTSTGDQANQVV LDKESFLADHHDLLQRFGMDLFPMLVQVVNSGANIYVCYGCLSVISKLVFLSKPDMLGEL LKTANIPSFLAGVFTRKDHHLLMLALQIAEIILKKLSDVFLSSFIKEGVFYVIDALLMPE KCSQLMLPVFGGIQPSFDSSQKSSVREFQRCLCYAFDMVPSSSVSSCKIDKDTVCNLAKH IKTNYFAPELIESDKGMTDVLQNLRTLSAALSNLINMPVDDDTTVHHEEKFYSILHQIML KLNGREPVSTFEFIESGIVKSLMHYLSDGLHMRGNVEFTGSYDHLVVLGKRFEVFTKLFF SYSDILVEDLPLSILIQKLQSGLSTLENFPVIPSHGFKQRNSFATVPNGRCVMYPCFRVR FARAEGENCLSDCAEDVLAVDPFSSLDAIEGYLWPKVFTERTEYGELDAEELEHREVLPN LLSSNANSTQGESSGFIDSMSIDLPEMQEDEANFSQIASEQVHFRELNSGETMSLDETNM GSAGKEQEFPTESTKNMRTPCSAAGDNDIKDSSARLLLYLEGHQLDRTLTLYQVILQQLL NSEKEFMTWAKLWSRVYTITYKRALESNQDDPQEHTYKERKFSVSDQKIASIQNMGFFAS MFACKLTSDLDKSSPIYDILFLLKLLEGINKYSFHLMSCERVRAFAEGRNDNLDNLKVMV RSVSQNEFVSSRLTGKLEQQMQDAFTLSTGGMPSWCNDLVSSCPFLFSFEARCKYFRLAA FGPRRGQLNAISRSNSGASSDRQTTSGGLPRKKFLVSRDQILDSATRMMDLHAHHKGLLE VEYNEEVGTGLGPTLEFYTLVSHEFQKFGLGMWRGDHCSFITSTTLPTESVILRNGSGLF PRPCSPKSDANNGIQFSQVLKKFVLLGQIVAKAIQDGRVLDVSFSKAFYKLILGQDLSLY DIQSFDPELGRTLLEFQAIIVNQKRHQKSICVENTALKQDLCFRNTRIEDLFLDFTLPGY PDYVLSSECNLKMVNSANLEEYLELIVDATIHSGIARQVEAFKSGFNQVFSIIHLHVFTE EELERLLCGECDIWAFNELLEHIKFDHGYTASSPPIVNLLEIIQEFEYSQRRAFLQFVTG APRLPPGGLASLNPKLTIVRKHSSNCADTELPSVMTCANYLKLPPYSSKEKMKEKLLYAI SEGQGSFHLS NT seq 4713 nt NT seq  +upstreamnt  +downstreamnt atgggaagtcgagggcagaaacgaacggaaacagccgacgaattaccagcagataagcga gcttgtagttcattagattttcgaccaagttcctctaactgttcctcagtcagaactcac ctcaatttaccaaattccactcccgatgctgacatggaaacttcctcctccacctcggct tcgagccgatcggatggtgaacacgagaaggaagacgaatcagcttatggatcatgcgat tctgacgatgctgagcaacaaccacggcaccacattttaagagactatcagagaagaaga tcgtcgagtgatcatggaaaattgaatactattttgtcaaatttgaacgaaggaaatgga ggttcgggccaactggctgcgttgactgaactttgtgaagtgttgtctttttgtaatgag gattcgctttcgagtttgatggcggattctttatcaccagtacttgtaaagcttgcgaag aacgagagtaatgctaatataatgttgttggcaattaggggtatgacttatctatgtgat gtatatcctagatcatctggtttccttgttagacacgatgcagttcctgctctttgtgaa agattattggctattgaatatgtggatgtagctgagcagtgtttgcaagcattggagaaa atatctcgcgatcaaccagttgcttgtttacaagctggtgcaattatggctgttctaaat tttattgattttttctcaattagtgtgcagagagttgcacttgccacggtggtgaacatt tgtaagaaacttcctttggagggtcctgcaccttttgttgaagcggttcccaaattatgt gatttacttcagcatgaggaccaacagcttgttgaaagtgttgcaacttgcttgatcaaa atatctgagagaatgtgtcagtcttttgagctgatggaggaactctgtaagcatgagctg attaatcaagtcacacttgttatgaaatcgaatagccgaactactatatcccagccaata tacaatggcttgataggattacttgtcaagctttcttcgggttcatttgtagcttttaga agtctgtatgagctaaatataagcaacatactgaaggatgtcttatctacttatgacctc tcacatggaatatctcctccggacttagttgatggcaattgcaatcaggtacatgaagtt ctgaaattgctcaatgagctgcttcccacctccaccggagatcaagctaatcaggtagtg ttggataaggaatcatttttagctgaccatcatgatcttctgcaaagatttggaatggat ttatttcccatgctggtccaggtagtcaattctggtgcaaacatatatgtttgttatggc tgcctctctgtcatcagcaagttagtttttctgagcaaacctgacatgcttggtgaattg cttaagactgccaacattccaagtttcctggctggagtgtttactcggaaggatcaccat ttgctgatgttagccctacagattgctgagatcatcctcaaaaagctttctgatgttttt ttgagctcattcataaaggagggtgttttttatgtgatagacgcacttctaatgcctgaa aaatgctcgcaattgatgcttccggtgtttggtggtatccaaccatcatttgattcaagc caaaagtcttctgtgagggagttccagagatgcttgtgttatgcatttgatatggtgcca tcttcttcagtctcatcttgtaagattgacaaggatactgtttgcaatcttgcaaaacat attaaaaccaattactttgctccagaattaattgaatccgacaaagggatgactgatgtt cttcaaaatctcagaaccttgtctgctgccttgagtaatttgataaacatgcctgttgat gatgatactactgttcatcatgaagagaagttctacagcatattacatcaaattatgctg aagcttaatggtagagaacctgtttctacttttgaatttattgaaagtggaatcgtgaaa tcgcttatgcattacctatctgatgggctgcacatgagagggaatgtggaatttactggc agttatgatcatttggttgttctggggaagagatttgaggtgttcacaaagttgtttttt tcttattcagatatccttgtcgaggacttgcctctctctatactaatacaaaaattacag agtggattgtcaactttggaaaatttccctgttattccaagccatggattcaagcagaga aattcatttgctactgtcccaaatggacgttgtgttatgtatccatgttttagggttcgt tttgcgagggcggaaggggagaactgcctatctgattgcgctgaagatgttttggctgtt gaccctttttcttccttagatgccattgaaggatatctttggcccaaagtttttactgaa agaacagaatatggggaattagatgctgaagagttggaacacagagaagttctgcctaat cttttatcatcgaatgcaaactctactcaaggcgagagttcaggttttatagacagcatg tccattgacttgccagagatgcaggaagatgaagctaacttttcacagattgcatctgaa caagttcatttcagagaattgaattctggtgaaacaatgtctttggatgaaaccaatatg ggctctgctgggaaggaacaagagtttcctacagagtcaactaaaaatatgagaactccc tgttctgcagctggtgacaatgacattaaagattcctcagctagactattgctttatcta gaaggacatcaactagaccgaactttgacgctatatcaagtgattcttcaacagctacta aattcagagaaagaatttatgacatgggcaaagttatggagtcgagtatacacaataaca tacaaaagagctctagaatctaaccaagatgatcctcaagaacatacatataaagaacga aagttctcagtatcagatcaaaagattgcctctattcagaatatgggattttttgccagc atgtttgcttgcaaactcacttctgatttggataagtcaagtcctatttatgatatattg tttctgctcaaacttttggaaggcatcaacaaatattcatttcatctgatgtcttgtgag agagttcgtgcatttgctgaaggtaggaatgataacttggataatttgaaggtaatggtt cgttcagtgtctcaaaatgaatttgtgagcagtagattgacaggaaagctagaacagcag atgcaggatgctttcaccttatccactggtggtatgccttcatggtgtaatgatttagtt tcttcttgtccctttctgtttagctttgaggcaagatgcaagtacttccgtttggctgct tttggtccacgaagaggtcaactcaatgccatttcacgtagtaattctggcgcttcaagt gacaggcaaactacttcaggtggtttgcctcgtaagaaatttttagtctcacgtgatcaa attctagattctgcaaccagaatgatggacctacatgctcatcataagggacttcttgaa gtggagtataatgaagaagttggcactggtcttggtccaactttggaattctatactctt gttagtcatgaatttcagaaatttggccttggcatgtggagaggggatcattgttctttt atcacttcaactaccttgcctacagaatctgtaattctgagaaacggttctgggcttttc cctcgtccatgttcacctaaatctgatgcgaataatggaatacagttttctcaagtacta aaaaaatttgttcttttgggtcaaattgtcgcaaaggctattcaagatggaagagtactt gatgtttccttctccaaagccttctacaaattaattttggggcaggaccttagtttgtat gatatccaatctttcgatcctgagcttggtaggacgctactggagtttcaggctattatt gttaatcagaaaaggcatcagaaatccatttgtgttgaaaacacagcattgaaacaggat ttgtgctttcgaaataccaggattgaggacctttttctggactttacccttcctggttat cctgattatgttctttcttctgagtgtaatctcaaaatggtaaattctgccaatttggag gaatatcttgagcttattgtggatgctaccatacatagtggaattgccagacaagttgaa gctttcaagtctggatttaatcaggttttttcaattatccatctccatgtttttacggag gaggaactagagcgtttactctgtggagaatgtgatatctgggctttcaatgaacttctg gaacatatcaagtttgatcatggatatacggctagcagtccaccaatcgttaatcttctg gaaattatacaagaatttgaatattcacaaaggcgagcatttctgcagtttgtgactggt gctccccggctacctccaggaggtttggcgtctttaaatccaaaattgacaattgttcgc aagcatagtagcaattgtgctgatacggagctgcccagtgttatgacttgtgccaattac ctgaagttgcctccttattcttcaaaagagaagatgaaagagaagctattatatgccata agtgaagggcaaggctcattccacctttcgtag

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