KEGG   Gossypium arboreum (tree cotton): 108489363
Entry
108489363         CDS       T05776                                 
Name
(RefSeq) uncharacterized protein LOC108489363
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108489363
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gab03041]
    108489363
Spliceosome [BR:gab03041]
 Complex A
  U2 snRNP components
   U2 related factors
    108489363
 Complex B
    108489363
SSDB
Motif
Pfam: RRM_1 RBD_DEAH11
Other DBs
NCBI-GeneID: 108489363
NCBI-ProteinID: XP_017649360
LinkDB
Position
10:complement(96158342..96165158)
AA seq 1018 aa
MGRSSRRKEKHEKVGELPQHDSNEGTSARTRPFNYDEIMSKRNSKKVDEKVESVKEEKDS
LIHNDFNFNRYDGGNGQGKEISVGHERHLLGDREKRSSRKKIENADRRNDSISKQKTREN
HEPERRLKSEVRKDTDGKDESKYEKQTHVKRKTEKAAGGSENVYAKKHSRDLVERDRHVS
RNEGKSERDDKRKHQSRDDEENRERHTTKRHETRKEHASETSDRKEKKDPLRSHHEDSNH
KRRRSQSQEREDRHRRSISLSPRLHKRASHHVSEHEISSHGVKVRSGKHSDDRSRMTSNG
SSGHHRRHGGSSSGLGGYSPRKRKTEASVRTPSPVHRSTEKRTAKWDLAPAETENMVSGS
ASTNLQASSQLVSINMHAMVNAVPSVSVIGNPLVVSSAGSLSFDSVQLTEATRPMRRLYV
ENVPTSASEKAMMESFNNFLLSSGINHIRGTKPCISCIIHKGKGQALVEFLTPEDASAAL
SFDGSTLSGSILKIRRPKDFVEVTGEPEKSEATVITVNDVVEGSHDKIFIGGISKALSSE
MFLEIANAFGPLKAYHFDNNEDLHEQYAILEYVDQFVTHKACAGLNGMKLGGQVITAVQA
VLDGFSSGNGGDRNSCIIPQLARPLLQKPTQVLKLKNLFPEDFSSLSEAEVEEVLEDVRL
ECSRFGTIKSVNVVKHAKSIMANGENKMNDNTRETGTREKLADDKINVETETMEEVTDGN
SGRTAVVNFPSNSHDLVAGNSYNDEKPAGNLSDNELCRQGEFEGDINNEDVNHGSLDDEP
YPPGGLDSNSSAGARLDTEMAVEDLTLEIVDKTISREAPNPIHTSKEESNYHFDRNADKI
KSEAMNVEKISVVEENANLEKVNRKLPEGHTKIEDPPFKSESIISFQEIPALLNTPKEEP
DSQNDKVADNIKSKIINVDKILVPKEDLQQEVGTGKLPKAVDGSAGSTRMEFDAIEKDEN
REQNDLNKIFEPGCVFVQYRRTEASCMAAHSIHGRLFDNRVVTVEYINPNLYRVKFPK
NT seq 3057 nt   +upstreamnt  +downstreamnt
atgggcagatcgagtcggcgtaaggaaaagcatgaaaaagttggggagcttccacaacat
gattccaatgaaggaacttctgcccggactaggcctttcaactatgatgagattatgtcc
aagaggaatagtaaaaaagttgatgaaaaagttgaaagtgtcaaagaagaaaaggacagc
ctaatccataatgattttaattttaacagatatgatggaggaaatggacagggcaaggaa
atttctgttggtcatgaaaggcacctattgggggacagggagaagagaagttcccgcaag
aaaatagagaatgcggataggagaaacgatagcatctctaaacagaaaactagggagaat
catgagcctgaaagaagattgaagtctgaagtgagaaaagatacagatggtaaggatgaa
agcaaatatgagaaacaaactcatgtgaagagaaaaactgagaaagcagctggtggttca
gaaaatgtatacgctaagaagcattctagagacttggtggagagggataggcatgtcagc
agaaacgaggggaaatctgagagagatgacaagagaaaacatcaaagtagagatgatgaa
gaaaatagagaaaggcataccacaaaaagacatgagacccgaaaggagcatgcttcagaa
actagtgataggaaggagaagaaagacccattgagatcccatcatgaggactcaaaccat
aaaaggagacgttcacagagccaagagcgtgaggacaggcatagaagatctatttctctc
tcaccaaggttgcacaagcgtgcatctcatcatgtgtcagagcatgaaatttcctcacat
ggtgtaaaagtgaggtctggaaaacattctgatgacaggagcagaatgacaagtaatggt
tcgagtggccaccataggcgacatggtgggtccagtagtggtcttggtggctactctcca
aggaagagaaagactgaagcttctgttaggacaccctccccagttcatcgttcaacggag
aagagaacagctaaatgggatcttgcacctgcagaaacagaaaatatggtttctggttca
gcttctactaatttacaggcatcaagtcaattggtttccataaatatgcatgctatggtc
aatgctgttcctagtgtttcagtgatagggaatcctctagttgtgtcttcggctggctct
ttatcctttgactcagttcaactaactgaagctaccaggcctatgagaaggctttatgta
gaaaacgtgccaacttcagcatctgagaaagctatgatggaatccttcaacaattttttg
ctttcatctggcattaatcatatccgtggaaccaaaccatgcattagctgtataatacac
aaaggaaagggccaagctcttgttgaattccttacaccagaggatgcttcggcagctctt
tcttttgatggcagtaccttgtctggttccattctcaaaatcaggcgccctaaagacttc
gttgaagtgactggtgaaccagagaaatcggaagcaacagtgattacagtcaatgatgtt
gtggagggttcacatgacaagatattcattggtgggatttcaaaggctctttcatctgaa
atgtttctggagattgctaatgccttcggtcctttgaaggcatatcactttgataacaac
gaggatctccatgaacaatatgctattctcgagtatgtcgaccagtttgttactcacaaa
gcctgtgctggtctgaatggaatgaagttgggagggcaagtaatcactgcagttcaggct
gttcttgatggcttttcctcgggaaatggtggagatcgaaattcctgtattattcctcaa
cttgcgaggccgcttcttcagaagcctactcaagtccttaagcttaaaaatctgttccca
gaggacttctcatctttatctgaggcggaggtggaagaagtactagaagatgtacggtta
gagtgttccaggtttggtacaatcaaatccgttaatgttgtcaagcatgcgaagagtatc
atggcaaatggagaaaacaaaatgaatgataatacaagggaaactggaaccagagagaag
ctagctgatgacaaaataaatgttgaaacggagacgatggaagaagtcactgatggaaac
tctggacgaactgctgttgtgaactttccaagtaactctcatgatttagtggcaggcaat
agttataatgatgagaaacctgctggcaacctttctgacaacgagttatgccgacaaggt
gagtttgaaggtgatatcaataatgaagatgtaaaccatgggagtttggatgatgaaccg
tatccaccaggggggcttgatagcaacagttctgctggagctcggcttgatactgaaatg
gctgttgaagatctgactttggagattgtagacaagacaatttctcgagaggcccctaat
ccaattcatacctcaaaagaggaatcaaattatcattttgacaggaatgctgataaaatt
aaaagtgaagccatgaatgttgagaagatatcagtagttgaagagaatgcaaatctggag
aaagtcaatagaaagttacctgaaggtcatacaaagatcgaagatcctccctttaagagt
gagtcaataataagttttcaagagatccctgccctgctgaataccccaaaagaggaacca
gactctcaaaatgacaaggttgctgataatattaaaagcaaaatcataaatgtagacaag
atattggtgcccaaagaagatctgcaacaggaagtaggcactggaaagttaccaaaagct
gtagatggttccgctggtagcacgagaatggaattcgatgctattgagaaggatgaaaat
agggagcagaacgatttgaataagatttttgagcccggctgtgtttttgttcagtataga
agaacagaagcatcatgcatggctgcacactctatacatggacggttatttgataaccgg
gttgtgacagtagagtacatcaatccaaacctttaccgggtgaaatttccgaaatga

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