KEGG   Gossypium arboreum (tree cotton): 108489417
Entry
108489417         CDS       T05776                                 
Name
(RefSeq) probable pectate lyase 8
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab00040  Pentose and glucuronate interconversions
gab01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:gab00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    108489417
Enzymes [BR:gab01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     108489417
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix NosD
Other DBs
NCBI-GeneID: 108489417
NCBI-ProteinID: XP_017649449
UniProt: A0A0B0MIE4
LinkDB
Position
11:complement(16247986..16252251)
AA seq 445 aa
MEISRRFFFSSFTLLLVMLFVCVNGSAEKTELNSRLAEGNKLQGLKNSSTADGLDDDKWK
NEHAVDNPEEIASMVDMTIKNSTARRNLGYFSCGTGNPIDDCWRCDRRWYRRRRRLASCG
IGFGRNAIGGRDGRYYVVTDPGDDNPVNPKPGTLRHAVIQDRPLWIVFKRDMVITLKQEL
IMNSFKTIDARGVNVHIAYGACITIQYVTNIIIHGLHIHDCKPTGNAMVRSSPSHYGWRT
MADGDGISIFGSSYIWIDHNSLSNCADGLIDAVMGSTAITISNNYFTHHNEVMLLGHSDS
YVRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGN
RYLAPVNPFAKEVTKRVDTYSDEWKHWNWRSEGDLLLNGAYFTPSGAGRAANYARASSLS
AKSSFLVGTLTSNAGALACRPGRMC
NT seq 1338 nt   +upstreamnt  +downstreamnt
atggagatttctcggagattcttcttctcttcatttacgttgctacttgttatgttgttc
gtttgtgtcaatggctcagcagagaaaacagagctgaactcaaggcttgctgaaggaaac
aaattgcagggcttgaaaaactcatcaacggcagacgggttggatgatgataaatggaaa
aatgagcacgcagtcgacaatcctgaagaaattgcttcaatggttgatatgaccataaaa
aatagtacagcaaggagaaacttgggatatttctcgtgtggaacagggaatccaatcgat
gactgttggagatgtgaccgacgatggtatcgtaggagaagacgccttgcaagctgcggc
attgggtttggacgcaatgctattggtggtcgtgatggaaggtactatgttgtgactgac
cctggcgatgataaccctgtgaaccccaaaccaggaaccctccgccatgctgttatccaa
gacaggcctctttggatcgtgttcaagcgtgacatggtgatcacgttgaagcaggagctg
ataatgaacagttttaagacgattgacgctcggggcgtcaacgtgcatattgcttacggg
gcctgtatcaccatccagtatgtcaccaacattatcatccatggactccacattcatgat
tgcaagcccaccggcaacgccatggtccgtagctccccttctcattacggatggagaacc
atggctgacggtgatggcatttcaattttcgggtcgagttacatctggatcgaccacaac
tcgctgtctaattgtgccgatggacttatcgatgctgtaatgggatccactgcgatcaca
atctcaaacaactacttcacccatcacaatgaggttatgctgttgggacatagtgactct
tatgtaagagacaagcagatgcaagtcaccattgcttataatcatttcggtgagggcctt
atccagagaatgccaaggtgtagacacggatatttccatgtcgtaaacaatgactacacg
cactgggaaatgtatgcaattggtggaagtgcaaatcccaccattaacagccaaggcaac
cgttaccttgcccctgttaatccctttgctaaggaggtgacaaagagagtggacacatat
agtgatgaatggaaacattggaattggaggtcggagggagacctgttgttgaatggagct
tatttcactccatcaggtgctggaagagctgccaactatgccagggcctcgagcttgagc
gccaaatcgtctttcttggtcggcacccttacttcgaatgcaggtgcccttgcctgccgc
ccaggccgcatgtgctaa

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