Gossypium arboreum (tree cotton): 108489450
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Entry
108489450 CDS
T05776
Name
(RefSeq) nuclear pore complex protein NUP96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108489450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108489450
03036 Chromosome and associated proteins [BR:
gab03036
]
108489450
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108489450
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108489450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
108489450
NCBI-ProteinID:
XP_017649497
UniProt:
A0A0B0P3R7
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All DBs
Position
10:11986417..11994430
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AA seq
1062 aa
AA seq
DB search
MPSVAGTLCEIHSTASEISRRGTEVNTENSDLHVTLYKKRKISAISDFFPHVMRRIEESL
PSLHSPDYYMEPCLEDMVRMERLEPGYCSHVPDFVVGRSGYGCVKFFGKTDVRGLDLDQI
VKFHRHEVIVYEDESNKPMVGQGLNKTAEVTLKLQIENLGLEKQEVDSIVKKLRQSMRNQ
GAHFIAFDPANGEWKFLVDHFSRFGLSEDDEEDIIMDDATGAIQDPGVMNGGGNPEIDED
MQLDTNGPLLSHSLPAHLGLDPVKMREMRMLMFPVEEEEDIEDFRGTGSNQKQAFAKEYI
RSSLHNSSQRMPNRTSPPVVRKTPVALLEYNSGTFDSSSSGTVLMTQENKGLPLKTTKRE
GFKLDIKQETPVTGSHSHNIVDAALFMGRSFRVGWGPSGILVHSGAPVGSNDGQRVLSSV
INVEKVAIDKVVRDENSKVKKELVDFAFDAPLNLHKALNYEEKEVDVGSFQLKLLKVVSN
RLELSGICRSYIDIIERQLEVPGLSSSARLVLMHQVMVWELIKVLFSERENTGQLKSMAA
DNEEDMMQDIKEGPPEVDLEALPLIRRAEFSCWLQESVCHRVQEEVSSVNDSGYLEHLFF
LLTGRQLDAAVELAASKGDVRLACLLSQAGGPTVNRSDVSRQLDIWRINGLDFNFIEKDR
IRLYELLAGNIHGALHGIKIDWKRFLGLLMWYHLPSDTALPVVFRTYQHLLDGGKAPFPV
PIYIDEGPVEENANLSRVERFDLSYYLMLLHASEESQLCSLKAMFSTFSSTHDPLDYHMI
WHQRAILEAVGAFHSNDLQSLDMGLVSQLLCQEQCHWAIYVALHMPYRDDYPYLQAALIR
EILFQYCETWSSQESQRRFIEELGIPLQWLHEAMAVYYNYHGDLPRALEHFLECENWQKA
HSIFMTSVAHELFLSAKDSEVWRIATSMENHKSEIENWDLGAGIYISFYVLRSSFQDDNN
TMAELGSLDSKNAACRDFLGCLNESSAVWGGRLHVDARVAYSKMADEVCNLLLSDTSGSR
THDEQLSCYYTVFSAPIPEDLHSSHLQDAVAVFTFQLSEVLS
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagttgcagggactttgtgtgaaattcatagtacagcaagtgaaatttctaga
agggggacagaagtcaatacagaaaattctgatttacatgttacattatacaagaagaga
aagatatctgcaatttctgattttttcccacatgttatgagaaggatagaggagtcttta
cccagtttacattcccctgattattatatggagccttgcttggaagatatggtaagaatg
gaacgcttggaacctggttattgcagccatgttccggattttgtggttgggagatctggt
tatgggtgtgtaaaattttttgggaaaactgatgttagagggttggatttagatcaaatt
gtgaaattccataggcatgaggtaattgtctatgaagatgaaagcaataagcccatggtt
ggtcaaggccttaacaaaactgccgaggtaactttgaaacttcagattgaaaatttaggc
ttggaaaagcaggaagtagatagtattgttaagaaattaagacagagtatgcggaatcaa
ggggcacacttcattgcatttgaccctgctaatggtgaatggaaattcttggttgaccat
tttagcagattcgggttgagtgaagatgacgaggaagatattataatggatgacgcaaca
ggggctatacaagatcctggggtaatgaatggtggtgggaatcctgagattgatgaagat
atgcaactggatactaatggaccactgctttctcattctcttcctgcccatcttgggctg
gaccctgttaagatgagagaaatgaggatgttgatgtttcctgttgaggaagaagaggac
attgaggattttagaggaacaggttctaatcagaagcaggcctttgctaaagaatatata
aggtcctctttgcataactctagccagaggatgcccaataggactagcccacctgttgta
cggaaaaccccagttgctttgcttgagtacaactctggtacttttgattcaagctcatct
ggaactgttctgatgacacaagaaaataagggtttgccactgaagacaacaaaaagggaa
ggtttcaagttggacatcaaacaagagacacctgtcactggaagccattctcacaatata
gttgatgcagcattgttcatgggtaggtcatttcgtgtaggttgggggccaagtggcatt
cttgtgcactctggtgcacctgtaggtagtaatgatggccaaagagtattatcttctgta
atcaatgtagaaaaagtggcaattgataaggtagttagagatgaaaatagcaaagtaaag
aaagaacttgttgactttgcttttgatgctccattgaatcttcataaagctctaaattat
gaagaaaaagaagtggatgttgggtcctttcagctgaagcttctgaaggttgtttctaat
cgcttagagctttctggcatttgtaggagctatattgacattattgagaggcagttggag
gttcctggtttatcttcttctgctcgcttggttttgatgcatcaagtgatggtgtgggaa
ttgattaaagttcttttctcagagagggaaaatactggtcaactgaaatctatggctgct
gataatgaggaagatatgatgcaagatatcaaggaaggtcctccagaagtagacctggaa
gcacttcctcttattaggagagccgagtttagttgttggctgcaagaaagtgtatgtcac
cgtgtacaagaagaagtaagctctgtgaacgattcaggttacttggaacacttattcttt
ctcttgactgggcgacaacttgatgcagctgtagagctggcagcttctaaaggagatgtt
agattggcttgtttactaagccaggctggtggaccaacagttaatcgttctgatgtttca
agacagcttgatatttggagaattaatggtctggacttcaatttcatcgagaaggacagg
attcggctttatgagttgcttgctggcaatattcatggtgctttgcatggtattaagatt
gactggaagagattcctaggattgttaatgtggtatcacctaccttcagatactgctttg
cctgttgtgtttcgaacttatcagcaccttcttgatggtggaaaagctccgtttcctgtt
ccaatttatattgatgaaggaccagttgaagagaatgcaaatttgagcagagtggaaaga
tttgatctttcatactatcttatgcttctgcatgccagtgaagagagtcaactatgttct
ctgaaggcaatgtttagcaccttctcttcaacacatgatccccttgactaccatatgatc
tggcatcagcgagcaatcttggaagctgttggtgctttccattctaatgatcttcaatca
cttgacatgggacttgtatcccagttactatgtcaggagcagtgtcactgggctatctat
gtagcccttcacatgccctaccgtgatgattatccttaccttcaagctgctcttattagg
gaaattctgttccaatattgtgaaacttggagttcacaagaatcacagcgccgatttatt
gaggaattgggtattcctttgcagtggttgcatgaagctatggcagtttattacaattac
catggggatttgccaagggctcttgagcactttctggaatgtgaaaattggcaaaaggct
cattctattttcatgacttcagttgctcatgaattgttcttgtctgccaaggactcagag
gtatggaggattgccacatccatggagaaccacaagtctgaaattgaaaattgggatttg
ggagctggaatatatatttcattctatgtgctaagaagttcattccaggacgataacaat
actatggctgaacttggttccctcgacagcaaaaatgcagcttgtagagactttcttggc
tgtttgaatgagtcctcagcagtttggggtggcaggttacatgttgatgctagggtagca
tattcaaagatggcggatgaggtatgcaatttgttgctttcagatacaagcggaagtcga
acgcatgatgaacagttaagctgctattatacggtgttcagtgctcccattccggaagac
cttcattcgagtcatttacaggatgcagttgcagttttcactttccagctttcagaagtg
ttgagctaa
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integrated database retrieval system
