KEGG   Gossypium arboreum (tree cotton): 108489459
Entry
108489459         CDS       T05776                                 
Name
(RefSeq) autophagy-related protein 13a
  KO
K08331  autophagy-related protein 13
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:gab00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    108489459
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gab04131]
    108489459
   03029 Mitochondrial biogenesis [BR:gab03029]
    108489459
Membrane trafficking [BR:gab04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    108489459
   Atg1 complex
    108489459
Mitochondrial biogenesis [BR:gab03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    108489459
SSDB
Motif
Pfam: ATG13
Other DBs
NCBI-GeneID: 108489459
NCBI-ProteinID: XP_017649509
UniProt: A0A0B0NBZ3
LinkDB
Position
12:complement(117017758..117021235)
AA seq 622 aa
MEMDRESGKLEQIVSQFRSKILHVILDSRVPSLHHHHQLQQQESLSHSRVRKTDKWFNLV
LGDRPPALEYLNFSLRNLLDPMVIDIILVHRGSCSSSVDNLYSPSAPAVGPADETVIERW
VVQYDCPRFIATPSGADASVSYKKIYKKSIILLRSLYTQMRLLPAYRIFKQLSSLSQTYN
FDLVYKVSSFSHPFSREEESGMKEYSFAPVEALSGYLSVSVTYRATLSDFNLEPLVSLPP
KIITDYVGSPTTDPMRSFPSSEKGAHATSFPLRGARPPSSSPFQRPHSWSSGFHRGFPST
KTQSLAGSPPAYRTSPKPYDIASTPTDLYGNRIQNQRVSTLQQVTAYDEYKSSPPFSPSA
SPSTPSYLSGANPLLTRHCSETAPVTIPLPLTGRSTRYLSPNSSDPSRHSLPPLSPRSSK
HDASSQESPSGIRSYRKIEALRAGESPSGLSNNYSAQKVVRDSKDDSGRFSALLSSSGSP
NIGFSRSSSRLSFQDDMDDCEFSCPFDVDDVDVSDSSSQNTEGKKASEFTAQSNLVGKKS
QDAAVGILVQMLRTAPPLRQDSSCYSTHSLRTEYEGGVSIASGFFMPRKTADALEELNSY
REMKDLLLSKSGTPVVRQEEMK
NT seq 1869 nt   +upstreamnt  +downstreamnt
atggaaatggatcgagaatctgggaaattggagcaaattgtttcccaatttcgttccaag
atcttgcacgttattttggactctagggtcccttctcttcaccaccaccaccagctgcaa
cagcaagaatcgctttctcattctcgggtgagaaagactgacaaatggttcaatttagta
ttaggagaccgtcccccagctctggagtatctcaatttctcccttaggaatctcttggat
cctatggtaatagacataatactggttcaccgtggttcttgttcctcatcggtggacaat
ctttatagtccttcagctccagctgtgggacctgctgatgagactgttatcgaaagatgg
gttgttcaatatgattgcccacgatttattgctactccaagtggtgctgatgcttctgtt
tcttataagaagatttacaagaagtcaatcatacttttgagatcactttacacacaaatg
aggcttctccctgcatatagaatctttaagcagctaagttcgttgagccaaacttataat
ttcgatcttgtttacaaggtttcatcatttagtcaccccttctctagggaagaggagagt
ggtatgaaagaatatagttttgcacctgttgaggctctttcaggttacctttctgtgtcg
gtaacctaccgtgcaactctatctgatttcaaccttgagcctttggtgtctttgccacca
aaaattataacagactatgttggcagccctacgacggaccctatgagatcctttccttca
tcagagaagggtgctcatgctacatcctttcctttaagaggagcacgacctccatcttcg
tctccatttcaacgtccacacagctggtctagtggttttcacagaggattcccttctaca
aaaactcaatctcttgcaggatctccacctgcttatcgtacatctcccaagccgtatgat
attgcatctacacctactgatttatatggtaatagaattcaaaatcaaagagtgtcaact
ctacaacaggttactgcttatgatgaatataagtcgtcacccccattctcaccatctgct
tctccatcaactccgtcatacttatctggtgctaatcctttgcttactcgtcattgttct
gagacggctccagtaaccattccacttccactaactggcagaagtactagatatctttct
cccaactcttctgatccaagtaggcattcccttccccctttgtctcctagaagctcaaag
cacgatgcctcatctcaggaatctccttctgggattcggtcatacaggaaaatagaagct
ctaagggcaggagagtctccttctggcttatcgaataattattctgcacagaaggtggtt
agagatagtaaagatgactcgggtcgattctctgcattgttgtcttctagtggatcacct
aatattggattctctagaagctctagtagactatctttccaggatgacatggatgattgt
gagttctcttgcccttttgatgttgatgatgtcgatgtatctgattcatccagtcaaaac
acagaggggaaaaaggcttcagaattcactgcacagtcaaatctggttggtaaaaaatca
caagatgctgctgttggcattcttgttcaaatgcttagaacagcaccgcctctccgacaa
gactcgagttgctattcgacacattcattaaggactgaatatgagggaggtgtcagtatc
gcttctggattttttatgccgcgtaaaacggcagatgcgctcgaagagctcaacagctac
agagaaatgaaggatctactactatcgaagagtggaactccggttgttcggcaagaggaa
atgaagtag

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