Gossypium arboreum (tree cotton): 108489459
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Entry
108489459 CDS
T05776
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
108489459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108489459
03029 Mitochondrial biogenesis [BR:
gab03029
]
108489459
Membrane trafficking [BR:
gab04131
]
Autophagy
Autophagosome formation proteins
ULK complex
108489459
Atg1 complex
108489459
Mitochondrial biogenesis [BR:
gab03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
108489459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
108489459
NCBI-ProteinID:
XP_017649509
UniProt:
A0A0B0NBZ3
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Position
12:complement(117017758..117021235)
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AA seq
622 aa
AA seq
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MEMDRESGKLEQIVSQFRSKILHVILDSRVPSLHHHHQLQQQESLSHSRVRKTDKWFNLV
LGDRPPALEYLNFSLRNLLDPMVIDIILVHRGSCSSSVDNLYSPSAPAVGPADETVIERW
VVQYDCPRFIATPSGADASVSYKKIYKKSIILLRSLYTQMRLLPAYRIFKQLSSLSQTYN
FDLVYKVSSFSHPFSREEESGMKEYSFAPVEALSGYLSVSVTYRATLSDFNLEPLVSLPP
KIITDYVGSPTTDPMRSFPSSEKGAHATSFPLRGARPPSSSPFQRPHSWSSGFHRGFPST
KTQSLAGSPPAYRTSPKPYDIASTPTDLYGNRIQNQRVSTLQQVTAYDEYKSSPPFSPSA
SPSTPSYLSGANPLLTRHCSETAPVTIPLPLTGRSTRYLSPNSSDPSRHSLPPLSPRSSK
HDASSQESPSGIRSYRKIEALRAGESPSGLSNNYSAQKVVRDSKDDSGRFSALLSSSGSP
NIGFSRSSSRLSFQDDMDDCEFSCPFDVDDVDVSDSSSQNTEGKKASEFTAQSNLVGKKS
QDAAVGILVQMLRTAPPLRQDSSCYSTHSLRTEYEGGVSIASGFFMPRKTADALEELNSY
REMKDLLLSKSGTPVVRQEEMK
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggatcgagaatctgggaaattggagcaaattgtttcccaatttcgttccaag
atcttgcacgttattttggactctagggtcccttctcttcaccaccaccaccagctgcaa
cagcaagaatcgctttctcattctcgggtgagaaagactgacaaatggttcaatttagta
ttaggagaccgtcccccagctctggagtatctcaatttctcccttaggaatctcttggat
cctatggtaatagacataatactggttcaccgtggttcttgttcctcatcggtggacaat
ctttatagtccttcagctccagctgtgggacctgctgatgagactgttatcgaaagatgg
gttgttcaatatgattgcccacgatttattgctactccaagtggtgctgatgcttctgtt
tcttataagaagatttacaagaagtcaatcatacttttgagatcactttacacacaaatg
aggcttctccctgcatatagaatctttaagcagctaagttcgttgagccaaacttataat
ttcgatcttgtttacaaggtttcatcatttagtcaccccttctctagggaagaggagagt
ggtatgaaagaatatagttttgcacctgttgaggctctttcaggttacctttctgtgtcg
gtaacctaccgtgcaactctatctgatttcaaccttgagcctttggtgtctttgccacca
aaaattataacagactatgttggcagccctacgacggaccctatgagatcctttccttca
tcagagaagggtgctcatgctacatcctttcctttaagaggagcacgacctccatcttcg
tctccatttcaacgtccacacagctggtctagtggttttcacagaggattcccttctaca
aaaactcaatctcttgcaggatctccacctgcttatcgtacatctcccaagccgtatgat
attgcatctacacctactgatttatatggtaatagaattcaaaatcaaagagtgtcaact
ctacaacaggttactgcttatgatgaatataagtcgtcacccccattctcaccatctgct
tctccatcaactccgtcatacttatctggtgctaatcctttgcttactcgtcattgttct
gagacggctccagtaaccattccacttccactaactggcagaagtactagatatctttct
cccaactcttctgatccaagtaggcattcccttccccctttgtctcctagaagctcaaag
cacgatgcctcatctcaggaatctccttctgggattcggtcatacaggaaaatagaagct
ctaagggcaggagagtctccttctggcttatcgaataattattctgcacagaaggtggtt
agagatagtaaagatgactcgggtcgattctctgcattgttgtcttctagtggatcacct
aatattggattctctagaagctctagtagactatctttccaggatgacatggatgattgt
gagttctcttgcccttttgatgttgatgatgtcgatgtatctgattcatccagtcaaaac
acagaggggaaaaaggcttcagaattcactgcacagtcaaatctggttggtaaaaaatca
caagatgctgctgttggcattcttgttcaaatgcttagaacagcaccgcctctccgacaa
gactcgagttgctattcgacacattcattaaggactgaatatgagggaggtgtcagtatc
gcttctggattttttatgccgcgtaaaacggcagatgcgctcgaagagctcaacagctac
agagaaatgaaggatctactactatcgaagagtggaactccggttgttcggcaagaggaa
atgaagtag
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