Gossypium arboreum (tree cotton): 108489478
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Entry
108489478 CDS
T05776
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gab04812
]
108489478
Cytoskeleton proteins [BR:
gab04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
108489478
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Katanin_con80
WD40
ANAPC4_WD40
NBCH_WD40
eIF2A
Motif
Other DBs
NCBI-GeneID:
108489478
NCBI-ProteinID:
XP_017649544
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All DBs
Position
9:complement(61416333..61424402)
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AA seq
987 aa
AA seq
DB search
MSKRGYKLQEFVAHTTSVNCLSMGKKTCRLLITGGDDHKVNVWAIGKPTSLMSLCGHTSP
VESLAFDSAEVLVLAGSSTGGIKLWDLEETKMVRGLTGHRSNCTALEFHPFGEFFVSGSM
DTNLKVWDIRKKGCIHTYKGHTRGISTIRFTPDGRWVVSGGFDNVVKIWDLTAGKLLNEF
KFHEGHIRTIDFHPLEFLLATGSADRTVKFWDLETFELIGSSRPEATDFRSIAFHPDGRT
LFCGADDGLKVYSWEPVVCHDSVDMGWSTLGDLCINEGKLLGCSYYRNSVGVWVADIAHI
EPYGRNNQTEKKFNLERSYSSVKAGNGMRSTLGSRPLSPDCETKEIKNIYIDTAGSNPIA
TQKDGSLNSPKVLPPMDACEISDQEAVKKSPGTEVNAKPSVVPRDNPIGKNSSNSAKESI
TFSKTKPGMLLKPAHVRRPSVNKFEVEKLSATVDSGTPGNVKSGLDNATDLNSQSRLVSE
DGVRKSCDEKDSNIQSVIEKSEKVLSPQTPPNQETCNESLTCSKDSNSVKIVRGVAVVSG
RTRTLVEKFERRERLNSGDGPVTNDTPPLVLETDRTPTKMKEERQISETKAISANDVKQG
GSQISRMESTSSCEVSITGFQISRRESTPTSGGLITGDQLPRAELTSTPDKVIIGNQTSR
RESTPTSGGLVTGDQLPRAELMSNPDKVITGNQTSRKESTITPERIIAGNRISRRESNSA
SSGTITGNQISRMKSTSASDSITVNQIMRRESTSTADGMISRNQLSRREAISVNDRSGPN
GTVTENQISRRGLNSANDGNATIIESQVSKGTSISPDDGIITESLMQTHDIFLSTLRSRL
TKLQVVRHFWEKNNIKGAIGALQKLPDHSVQVDVISVLMEKMEILTLDLFSGLLPVLKGL
LDSKTDRHVNISLEMLLKLVAVFGPMVRSTVSAPRGIGVDLHAEQRRECCNQCFTQLQKI
LKLLPPLERRGGVIARCAQELNLVLQE
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcgtggatataagctgcaggaatttgtggcgcatacaacaagtgtaaattgt
ctaagtatgggaaaaaagacatgtaggcttcttattactggtggagatgatcataaagtg
aatgtttgggcaattgggaaaccaacttctctaatgagtctctgtggtcatactagtccg
gtggaatctttagcttttgattcggcagaagtcttggtgcttgctggatcatctacaggg
gggataaagctttgggacctggaagaaacaaagatggttcgcgggctaacaggacacaga
tctaattgcactgccttggaattccatccatttggtgagttctttgtatctggttccatg
gacacaaatctaaaggtttgggatatcagaaagaagggatgcattcatacgtacaagggc
catactcgaggcattagtacaattagattcactcctgatggtcgctgggtagtttctggt
ggatttgataatgttgtaaagatttgggaccttactgctggaaaactcttgaacgagttt
aagtttcatgaaggccatattcgcaccatagacttccatcctcttgagtttctgttagct
acaggttcagcggacagaacggttaaattctgggatttagaaacctttgaactgattgga
tcttccagacctgaggctacagattttcgctcaattgcctttcatcctgatgggagaact
ttgttctgtggagcagatgatggtttgaaggtttattcgtgggagccagtagtttgtcat
gattctgttgacatgggatggtcaacacttggcgacctttgcatcaatgaaggcaaactt
ttgggttgctcatactatcgaaattctgttggagtttgggtggcagatatagcgcacatc
gagccatatggaagaaacaaccaaacagagaagaaatttaatcttgagagaagttattct
tctgtgaaagcagggaatggcatgaggtctactttgggatcacggccattgtctcctgat
tgtgagacaaaggaaataaagaacatatatattgacactgctggcagtaatcctattgcc
acacagaaagatggctctttgaattctccaaaagtgttacccccaatggatgcctgtgaa
ataagtgatcaagaagcagtgaagaagagtcctggaacagaagtcaatgcaaaacctagt
gttgttccaagggacaatcctattggtaaaaactctagcaattctgcaaaagaatccatc
accttttcaaagacaaaaccaggcatgctgcttaaaccagctcatgttaggagaccatct
gtcaacaagtttgaggttgaaaagctgtcggctacagttgattcaggaactcctggcaat
gtaaaaagcggtttagacaatgcaacggatctgaattctcaaagtaggcttgtatcagaa
gatggagttagaaaatcatgtgatgaaaaggactcaaatatccagagtgttatagagaaa
tctgaaaaggtgttatcgccacagacaccccctaatcaagaaacttgtaatgaatccctt
acttgcagcaaagattcaaactctgtcaaaattgtcagaggagtggctgttgtttcaggg
agaacacgtactctggttgagaagtttgaacgaagagagagattaaacagcggtgatggt
ccggtaactaacgatactcctcccctggtacttgaaacagatagaacaccaaccaaaatg
aaagaagagagacaaatctccgaaacaaaagcaatctctgccaatgatgtcaagcagggt
ggaagtcaaatttctagaatggaatcaacttcaagctgtgaggtaagtattaccggattt
cagatttctagaagggaatcaactcccacttctggtgggctcattactggcgatcaactt
cctagagcggaattaacgtcaactcctgataaggtcattattggaaaccaaacttctaga
agggaatcaactcccacttccggtgggcttgttactggggatcaacttcctagagcggaa
ttaatgtccaatccagataaggtcattactggaaaccaaacttctagaaaggaatcaacc
ataacccctgagaggatcattgctggaaaccgaatttccagaagagaatcaaactctgct
tctagtggcaccattactggaaatcaaatttctagaatgaaatcaacctctgcttctgac
agcattactgtaaaccaaattatgagaagggaatcaacttccactgcagatgggatgatt
tctagaaatcaactttctagaagggaagcaatttctgttaatgatagaagtggaccaaat
ggtacagttactgagaatcaaatttctcggaggggattgaattctgctaatgatgggaat
gctactattattgaaagccaagtttcaaagggcacatcaatctctcctgatgatggaatc
ataactgaaagtctaatgcaaacacatgatatattcttaagcactcttaggtctcgcttg
acaaaattacaggtggtgcgacatttttgggaaaagaataacattaaaggtgcaatcggt
gccctgcagaagctgccggatcattctgtgcaagtcgatgtaatcagtgttctcatggaa
aaaatggagattcttactttggatctgttttctggcctgctccctgtgcttaagggctta
ttagatagtaaaacggataggcacgtaaatatctcgttggagatgcttttgaagcttgta
gcagtatttggtccaatggtacgctcaactgtttcagccccacgtggtattggtgtcgat
ttacatgctgagcaaaggcgagaatgctgcaatcagtgtttcacgcagctgcaaaagatt
ctgaaacttcttccaccactcgaaaggagaggtggtgtgatagcaagatgtgcacaagaa
ctgaatctagttcttcaagaatga
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