Gossypium arboreum (tree cotton): 108489534
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Entry
108489534 CDS
T05776
Name
(RefSeq) auxin response factor 18-like isoform X1
KO
K14486
auxin response factor
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108489534
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
108489534
NCBI-ProteinID:
XP_017649646
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Position
10:122593451..122596980
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AA seq
721 aa
AA seq
DB search
MSFDFHVLTGNHLVRKKQSKERVCYFFLFVHRIGEKMITVMDSRKEVVKNSEKCLDPQLW
HACAGGMVQMPSVNSKVFYFPQGHAEHANGNVDFGNLPIPSLVLCRVSAVRFMADPETDE
VYAKIMLIPLRENSFGVEDDGFDGNVGVENPEKSASFAKTLTQSDANNGGGFSVPRYCAE
TIFPRLDYNAEPPVQTILAKDVHGEVWKFRHIYRGTPRRHLLTTGWSNFVNHKKLVAGDS
IVFLRADNGDLCVGIRRAKRGLGGGHEFPGWNSVSGTSGSQVGSYSPFLREGESKLMRKD
CNGDPRGRIRADSVIEAASHAASGQPFEVVYYPRTSTPEFCVKASSVRAAMQIQWYPGMR
FKMPFETEDSSRISWFMGTISTAQVVDPIRWPNSPWRLLQVAWDEPDLLHNVKRVSPWLV
ELVTNIPAINLNPFSPPRKKMRLPQHPDISFLNQIPMPSFSGNSFRSSSPMRCITDNIPG
GIQGARHEPFGLSSSDLRSNKLHSGLFPSGFHQLDRTAPPTRLSGNNFCSDNANNTNISS
LLTIGNPTQSFKQSNDSKTPHIVLFGQLIFCEQRASQSCSGDTVGNSSSDGNTEKTAISS
DGTGSVLHQNVRENSSDEGFPWCKEDQKTDLGLETGHCKVFMESENVGRTLDLSVLGSYE
ELYGKLANMFGIESSEMLSSVLYRDAAGSVKHTGDEPFSEFMKTARRLTILMDSSSDNLE
R
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattttcatgtactaacaggtaatcatctagtgagaaaaaaacagagtaaa
gaaagggtttgttattttttcctttttgtccatagaattggggaaaaaatgataacagtc
atggattctaggaaagaagttgtgaaaaattcagaaaaatgcttagatcctcagctatgg
catgcttgtgctggtggtatggtacaaatgccatcagtgaactctaaggtgttctatttc
cctcagggtcatgctgagcatgccaatgggaatgtagactttgggaatctcccgattccg
tcgctcgtcttgtgtcgggtttccgccgttaggtttatggcggatcccgaaactgatgag
gtttatgctaaaatcatgttgattcctttgagagagaatagttttggggttgaagatgat
ggttttgatgggaatgttggggtggagaatcctgaaaaatctgcttcctttgctaagaca
ttgactcagtccgatgctaacaatggtggggggttctcggttccgcggtattgcgcggag
actatatttcctaggttggattataatgctgaaccccctgttcagactattcttgctaag
gatgttcatggtgaggtttggaaatttaggcatatatatagggggacgcctcgtcgacat
cttttgacgacggggtggagtaatttcgtcaaccacaagaagcttgtggctggtgattcg
attgtgtttcttagagctgataatggagatctttgtgtggggatccgtagggcgaaaaga
ggacttgggggtggacatgaatttcctggatggaactctgtgagtggaacctctggttca
caagttgggagttattctccgtttttgagggagggggagagtaaattgatgaggaaggat
tgtaatggggatccaaggggaagaataagggctgactccgtgattgaagctgcaagtcat
gcagctagtgggcagccctttgaggtcgtttactatccacgaactagcactcctgagttc
tgcgtgaaggcctcatccgttagagctgcaatgcaaatccagtggtatcctgggatgagg
ttcaaaatgccttttgaaactgaggactcttcacggattagctggttcatgggaacgata
tctactgctcaggttgtcgatcccatccgttggcctaattctccatggcgactactgcag
gtagcatgggatgagccagacttactccacaatgtgaagcgtgttagcccatggttggtt
gaattggtcacaaacataccagctattaatcttaatcctttctcgcccccaaggaaaaag
atgcggcttccacaacacccagacatttcctttcttaaccaaattccaatgccatcattt
tccgggaactcattcagatccagcagccccatgcgttgcattacggacaacattcctgga
ggcatacagggagccaggcatgaaccgttcggattatcgtcatcagatctccgctccaac
aagctgcattcaggtctgtttccatctggttttcatcaacttgatcgtactgccccacct
actagactttccggcaacaacttttgtagcgacaacgccaacaatacaaatatatcttcc
ttgttgacaataggaaatccaacccagagtttcaaacaaagcaatgatagcaagacaccc
catattgtattgtttggtcaactcattttctgtgagcagcgggcttctcagagctgctca
ggtgatacggttggaaacagttcatcagatgggaatacagagaagactgctatttcctcc
gatggaactggatctgtgttacatcaaaatgttcgggaaaattcttcggatgaagggttt
ccttggtgcaaagaggatcaaaaaactgatctaggattggagaccggtcattgcaaagtg
tttatggaatcagagaatgtaggtagaacccttgatctttccgttctcggatcatatgaa
gagctgtatgggaagctggccaacatgtttggcatagaaagttcagagatgctgagcagt
gtgctctaccgtgatgctgccggttcagttaaacacactggagatgagcccttcagcgag
tttatgaaaacagcaaggaggctaacgattctcatggattcaagcagtgacaacttagaa
agatag
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