Gossypium arboreum (tree cotton): 108489564
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Entry
108489564 CDS
T05776
Name
(RefSeq) mRNA-decapping enzyme subunit 2
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108489564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108489564
Enzymes [BR:
gab01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
108489564
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108489564
mRNA degradation factors
5'-3' decay
Decapping complex
108489564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
108489564
NCBI-ProteinID:
XP_017649692
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All DBs
Position
10:122700753..122706260
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AA seq
321 aa
AA seq
DB search
MSGLHRSSSAPLKNGLPPQELLDDLCSRFVLNVPKEDQQSFERILFLVEYAHWFYEDNTV
EKNPSLKSLNLKEFTSLLFNSCDVLRPYVAHIDDIFKDFTDYKVRVPVTGAIILDETYER
CILVKGWKGTSWSFPRGKKNKDEEDHACAIREVLEETGFDVSALLNKDEYIEVIFGQQRV
RLYIIAGVKDDTPFAPLTKKEISEIAWHRIDDLQPATNEVISRGITGLKLYMVAPFLASL
KSWISKHPSPLPPRPDLPLKGVSIWKAKNSSIGSNSMIVESQSNKLQSDAKPPDTGPGKS
FRNFRFDTAAVLRALEGSFST
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtctacatcggtcttcgagtgcgccattaaagaacggtcttcctcctcaagag
cttcttgacgatctctgcagtcggtttgttttaaatgttccaaaagaggaccagcagtca
tttgagagaattcttttccttgtggagtatgcacattggttctatgaggacaacacagtg
gaaaaaaatccatcactgaagtcattgaacctaaaggagttcacctctttattgtttaac
agctgcgatgttttaaggccttatgttgctcatatagatgatatttttaaggatttcact
gattacaaggttcgagttcctgtaactggggcaattattttggatgaaacatatgaacgg
tgcatcctagtgaagggatggaaagggacaagctggagtttcccacgtgggaaaaagaac
aaagacgaggaggaccatgcatgtgccattcgagaagtcttagaagaaacaggcttcgat
gtttcagctctcctaaacaaagatgaatacattgaagtaatatttggccagcagagagtg
cggctctatataattgctggcgtaaaggatgatactccctttgccccacttacgaaaaag
gagatcagtgaaattgcatggcaccggattgatgatcttcagcctgcaactaatgaagta
atatctcgtgggatcactggcctaaagctttatatggtggccccattcttagcatctctg
aaatcatggatttcaaagcatccgtccccactacctcctagaccagatttgcctctaaaa
ggggtctctatttggaaagcaaagaacagttccataggaagtaactcaatgattgtagag
agccaatcgaataagcttcaatccgatgctaagccgcctgatactggtcctggaaagagc
ttcagaaactttagatttgatacggcagcagtattaagagcattggaaggtagcttttct
acctga
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