KEGG   Gossypium arboreum (tree cotton): 108489638
Entry
108489638         CDS       T05776                                 
Name
(RefSeq) cullin-4-like
  KO
K10609  cullin 4
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03420  Nucleotide excision repair
gab04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108489638
  09124 Replication and repair
   03420 Nucleotide excision repair
    108489638
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gab04121]
    108489638
   03400 DNA repair and recombination proteins [BR:gab03400]
    108489638
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gab04147]
    108489638
Ubiquitin system [BR:gab04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     108489638
DNA repair and recombination proteins [BR:gab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      108489638
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      108489638
Exosome [BR:gab04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   108489638
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 108489638
NCBI-ProteinID: XP_017649802
LinkDB
Position
10:3990913..3997514
AA seq 826 aa
MSLPPTKRSLSSNAAVASSLSSSSSSSSSSSSHFQQSMKKAKSQAVACSLDPNKNGLHNH
HNNQGDNDVVFDPSSPMALDDDSKSDDGRAPAAANLSRKKATPPQPAKKLVIKFVKAKPT
VPMNFEEETWAKLKSAINAIFLKQPDSCDLEKLYQAVNDLCLHRMGGSLYQRIEKECEAR
ISAALKSLVGQSPDLVVFLSLVEKCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDM
GLQLFCKHLSLAPEVEHKTVTGLLRMIESERLGEAVDRTLLNHLLKMFTALGIYSESFEK
PFLERTSEFYAAEGMKYMQQSDVPDYLKHVEMRLNEENERCLLYLDALTRKPLIATAERQ
LLERHISAILDKGFMMLMDGHRIEDLQRMYSLFSRVNALESLRQALSSYIRRTGQSIVMD
EEKDKDMVSSLLEFKASLDSILEESFSKNEAFCNTIKDSFEHLINLRQNRPAELIAKFLD
EKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKS
MISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLRSGIEMSVHVLTTGYW
PTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKADFPKGKKELAVSL
FQTVVLMLFNDAQKLSFQDIKDSTGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDDDS
FIFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHT
LLITELFEQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq 2481 nt   +upstreamnt  +downstreamnt
atgtctctccccccaaccaaacgctctcttagctccaacgccgctgttgcttcttctttg
tcttcttcttcttcttcttcttcttcctcttcttctcactttcaacagtcaatgaagaaa
gccaagtcccaagccgtggcttgttctcttgaccccaataagaacggccttcacaaccac
cacaacaaccaaggcgataacgacgtcgtcttcgacccttcttcacctatggccctcgac
gacgattccaagtccgacgatggtcgcgctcccgccgccgccaatttgtctcgcaaaaag
gctaccccacctcaacccgccaagaagctcgtcatcaaattcgttaaagcaaaaccgaca
gtgcctatgaattttgaggaggaaacgtgggcaaagctgaagtcagccattaatgctatt
tttctaaagcaaccagattcatgtgacttggagaagctttatcaggctgtcaatgatctt
tgcctgcataggatgggaggaagtctttatcaacgaattgaaaaagagtgtgaagcacgt
atatcggcagcattaaaatctttggttgggcaaagtccggacctcgtggttttcttatcg
cttgttgagaaatgttggcaagatctttgtgatcaaatgttgatgattcgtggtatagcc
ttgtacctggacagaacatatgttaaacaaaccccaaatgtacgttcattgtgggacatg
ggcttgcaacttttctgtaaacatctttctctggctccagaagttgagcacaaaactgtc
accggtcttttaagaatgattgagagtgagaggttaggtgaagcagttgacagaacacta
cttaaccatcttttgaagatgtttactgctttaggtatttactcagaaagctttgagaag
ccattcctggagcgtacatccgagttttatgcagctgaaggaatgaaatacatgcagcaa
tctgatgttccagattacttgaagcatgtagagatgaggttaaatgaagaaaatgaaaga
tgcttactctacctggatgctcttacgagaaagccgcttatagcaacagcagaaaggcaa
ctgctggaacgtcatatatctgccattcttgataagggatttatgatgctgatggatgga
caccgtatcgaggaccttcagaggatgtactcactgttttcaagggtcaatgctcttgaa
tcactcaggcaggccctaagctcatatattcggagaactgggcagagcattgtcatggat
gaagagaaagacaaggacatggtgtcttccttgttagaattcaaggcttcacttgactcc
atattggaagaaagcttttccaagaatgaggcattttgcaacaccattaaggattctttt
gagcatctaattaatcttcgtcagaatcgacctgctgagcttattgctaagtttctggat
gaaaagcttcgtgctggtaataagggtacttctgaagaggaattagagggtacacttgat
aaagttttggttttattcaggttcatccagggcaaggatgtttttgaagcattctataag
aaagatcttgctaaaaggctgcttttagggaagagtgcttctattgacgcagagaaatcc
atgatttctaagctgaagacagagtgtggcagccagtttacaaacaaacttgaaggaatg
ttcaaggatattgaactatcaaaggagataaatgaatcattcaagcagtcatcccaagcc
aggacaaaacttcgatcaggaattgagatgagtgtccatgtcttaacaactgggtactgg
ccaacatatccacctatggatgttaggcttccacatgaattgaatgtctatcaggacatc
ttcaaggagttctacttgagtaagtacagtgggagacgcctaatgtggcaaaattcattg
ggtcattgtgtgttgaaagcagattttcccaaaggtaaaaaggagctggcagtttccctg
ttccagactgtagttctgatgttgttcaacgatgcccaaaagcttagctttcaagacatt
aaagactccactggcatagaggacaaggaattgagaaggaccttgcagtcccttgcgtgt
gggaaagtgagagtcctgcaaaagttgccaaaagggagagatgtcgaagatgatgattct
ttcattttcaacgaaggatttactgctcctctctatcgtataaaggtaaatgcaatccag
atgaaagagacagtggaggagaacacaagcaccactgaaagagtatttcaagaccgtcaa
tatcaggttgatgctgctattgttcggataatgaagacgaggaaagtgttgagtcacact
cttttgataactgaactcttcgaacagctaaagtttcccataaaaccggctgatttgaag
aaaagaatcgagtctctcattgacagggagtacctggagcgggacaagaacaacccacaa
atatacaattatttggcataa

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