KEGG   Gossypium arboreum (tree cotton): 108489677
Entry
108489677         CDS       T05776                                 
Name
(RefSeq) ubiquitin receptor RAD23b-like
  KO
K10839  UV excision repair protein RAD23
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03420  Nucleotide excision repair
gab04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108489677
  09124 Replication and repair
   03420 Nucleotide excision repair
    108489677
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:gab03051]
    108489677
   03400 DNA repair and recombination proteins [BR:gab03400]
    108489677
Proteasome [BR:gab03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    108489677
DNA repair and recombination proteins [BR:gab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      108489677
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin UBA_7 CUE Rad60-SLD TECR_N UBA_3 Rad60-SLD_2 Dsc3_N MmeI_C UBA_RAD5A Ubiquitin_2
Other DBs
NCBI-GeneID: 108489677
NCBI-ProteinID: XP_017649859
UniProt: A0A0B0NAN0
LinkDB
Position
10:complement(4868419..4872705)
AA seq 362 aa
MKLIIKTLKGSHFEIRVQPNDTVMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDETTLA
ENKVSEDGFLVVMLSKSKSLGSTGASSAQPASSTPSTTVPASAPSSNSTPATGAPAQASQ
QTNTYSQAASNLVAGNNLEQTIQQLMDMGGGNWDKETVTRALRAAYNNPERAVDYLYSGI
PESAEVAVPVAHFSTSQTTETGAAPAAPVSGAPNSSPLNMFPQETLSGAAAGGDGSLDFL
RNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLRLIQEHHAEFLQLINEPLEGSEGDI
FDQAEQEMPHAVNVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENGGDF
ED
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgaagctcatcatcaaaaccctaaaaggcagtcactttgaaattagggttcagcccaat
gataccgttatggctgtgaagaaaaacatagaggatatacaagggaaagacaattatcca
tgtgggcaacagctgttgattcataatgggaaggttttgaaagatgaaactactttagct
gaaaataaagtatctgaagatggttttctggttgtcatgcttagcaagagcaagtctttg
ggttcaactggagcctcttctgctcagcctgcttcatcaactccatctaccactgttcct
gcttctgcgccttcttcaaattctacacctgccacaggagctcctgcacaagcatctcaa
caaaccaatacctatagtcaagctgcttcgaatttagttgctggtaataatcttgagcag
actatccaacaattgatggatatgggtggaggcaattgggacaaagaaactgtaactcgt
gcacttcgggctgcttataacaacccagagcgagcagtggattatctatattctgggatt
cctgaatcagcagaagtggcagtgccagtggctcatttttctacaagtcagactactgaa
actggtgctgcccctgctgctcctgtttcaggggctcctaattcttcacctttgaatatg
tttcctcaggaaacactttctggggctgctgctggtggagatggatccctggatttcctc
cggaacaaccaacagttccaagcgttgcgatcaatggtgcaatcgaacccacaaattctg
cagcctatgctacaagagcttggaaagcaaaacccccagcttttaagactaattcaagag
catcatgcagaatttcttcagctaataaatgagcctcttgaaggttctgaaggggatata
tttgatcaggctgaacaagaaatgcctcatgctgtcaatgttaccccggcagaacaggag
gccattgaacgacttgaagcaatgggatttgatagagcccttgtgattgaagcctttttg
gcttgtgatcggaacgaggaattggcagcaaactatttgttggaaaatggtggagatttt
gaggactga

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