Gossypium arboreum (tree cotton): 108489853
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Entry
108489853 CDS
T05776
Name
(RefSeq) sister chromatid cohesion 1 protein 2 isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gab03036
]
108489853
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
108489853
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GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
SMC_ScpA
CNDH2_N
MCCD1
Motif
Other DBs
NCBI-GeneID:
108489853
NCBI-ProteinID:
XP_017650022
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Position
10:14787533..14794362
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AA seq
909 aa
AA seq
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MFISKCLVSKKGPLGAIWVAAYFFKKLKKSQISGTNISSSVDDILQNQLEILAYRVLAYL
LLGVVRIYSKKVEYLFDDCQELLIKINEFVVREKNRAKKEALRSASFSITRPVCFELDAF
DLEVLEDTSRDNEVPREEITLKDVAWTNAGTMQYSLDRIAALDDAFLIDYIPPEHSLSCH
LMTFETEARALHDVCESEASMEKLRCDTSIHEEVSHLKMVCRVEEEPLNIVKVFDKNERE
HLEVPDMSGLENCTVQEANREKISDRLLSEECLSLRFEAAEDSSGPFKLNPFAKDQTTSE
MIEGPDLLESEKELNQAMEEDHACVLEASAWVPDLAGSSSREKSNDRFSSEEGMNLHPEA
EEEPLIPVESLVEDLVNREKMGLLLPQFENEVYQVLEEDHVSMKASKEVPGIASSENRIG
REASRENHNDEFCQEECLNLIVEVEEKSPAFMKSFGEEQTSREKKKGSNRVQPENEVHHF
MEEGCNSGASVKKLQAEGFSDVDLQEPSTLVRPLAEENQTDAENGKFPAMRTSKDGKCQV
AAKDHPLSVTLDTNPLSMLRDASGATTPHFMLIPTPAKRERARFSRKRKCLFDEVIVFPN
DIMRQWIKDASDLVSKGRKDGHTALGARRTWISSLPQGFLEPSVPCTSELKSIYSGKRLR
ILKSVNIIKPPEQMDTSEPPAVDGSFEPAELTPATVEMRDPPVMLNLSKSPLFDGSSEQA
GIAPQTPIRQSTSLVVGEQTEIAPQTPVLYSKSLRHFGSPKDLKFYNLDVGPENVDPTQS
MKKEPSLNEIVEESSLNKNEDLDLNLDMHSNEDDNQGQDGWSSRTRMVAERLQMSFLDQR
EKKEEEKVNLSQLLEGKTKKASVRLFYEILVLKSTGLVDVQQEEAFSDIVVVKGPKWEEM
VFCLGRHVK
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgtttatttcaaagtgcctagtctcaaagaaagggccattaggtgccatatgggtagct
gcttatttcttcaagaaactcaagaaatctcaaatatctgggactaatatctcctcttct
gttgatgatattttgcaaaaccagcttgagattctggcatatagagtattagcctacctc
ctccttggtgttgtcagaatatactccaaaaaggttgaatatctttttgatgattgccaa
gagttgctgattaagataaatgaatttgtggttagagaaaaaaatagagcaaagaaggag
gccctccgatcggcttctttctcgattactagacctgtgtgctttgagttggatgcattt
gatctggaggtacttgaagatactagtagagataatgaggtgcctcgtgaagaaataact
ctgaaagatgtagcttggacaaatgctggaacaatgcaatattccctagataggattgcg
gcattggatgatgctttcttgatagattacattccacctgaacacagtctttcatgccac
ctgatgaccttcgagacagaagcaagagcattacatgatgtatgtgaatcagaagcaagc
atggaaaagcttcggtgtgatacctccattcacgaggaggtttcacatcttaaaatggtt
tgtagggtggaggaagaacctcttaacattgttaaagtttttgataaaaatgagagagag
catttggaggttcctgacatgtctggtctggagaactgtacagtgcaagaagcaaataga
gagaaaatcagtgatagattactgtcagaagaatgtttgagccttcgttttgaggctgcg
gaggattcctctggtccttttaaacttaatccatttgctaaagatcaaactactagtgaa
atgattgagggtccagatctattagaatcagaaaaagaattgaaccaggctatggaggaa
gatcatgcatgtgtcctggaagcaagtgcatgggttccggaccttgctggctcatcaagc
agagagaaaagcaatgataggttctcttcagaagaagggatgaacctgcatcctgaggct
gaggaggaacctctaatccctgttgaatcacttgttgaagatctagttaatagagaaaag
atgggtttgcttctgccacaattcgaaaatgaagtgtaccaggtattggaggaagatcat
gtgagcatgaaagcaagtaaggaggttccaggcattgcaagctcagaaaaccgtatagga
agagaagcaagcagggagaatcataatgatgaattctgtcaagaagaatgtttgaatctt
attgttgaggttgaggagaaatctccagctttcatgaaatcttttggtgaagaacaaact
agcagagagaagaagaagggttcgaatagggtgcaaccagaaaatgaagtacaccatttt
atggaggaaggttgcaactcgggagccagtgtgaagaagctccaggctgaaggtttctct
gacgtggaccttcaggaaccttccacacttgttagaccacttgctgaagagaatcaaact
gatgcagagaatgggaagtttccagcaatgagaacttccaaggatggaaaatgtcaggtc
gctgctaaagaccatcctttgtctgttacattggacacaaatcctctgtccatgttgcga
gatgcttcaggagctactacccctcattttatgcttatcccaactcctgctaaaagggaa
cgtgctcggttttctcggaagagaaaatgtttgtttgatgaagtgatagttttccctaat
gacataatgcggcaatggataaaagatgcaagtgatttggtctctaaggggagaaaggat
ggtcatactgctctgggtgcaaggaggacttggatttccagccttccccagggtttctta
gagccttcggttccctgcacgtcggagcttaaatctatctactctggaaagagattgcga
attctcaaatctgttaatatcataaaacctccggaacagatggacacttctgaacctcct
gcagttgatggatcttttgagccagcagaacttactccagcaactgttgaaatgagggat
cctccagttatgttgaacctctcaaaatctcctctatttgatggatcctcagagcaggcc
ggaattgctccacaaacacctattcggcagtcaacttcccttgttgttggagaacagaca
gaaattgctccacaaacacctgttctgtactctaaatcattgaggcattttgggagccct
aaggacctgaaattttataacttagatgtaggaccagagaatgtggatcctactcaaagc
atgaagaaagagccttctctgaatgaaattgtagaggagtcttccctgaacaaaaatgaa
gaccttgatctcaatctggacatgcattcaaatgaagatgataaccagggacaggatgga
tggtcttcaagaaccagaatggtggcagagagattgcagatgagttttctagatcaaagg
gaaaaaaaggaggaggaaaaggtgaacttatcacagcttctggaaggaaaaacaaagaaa
gcgagtgtgagactcttttatgagatactggtgttgaaaagtacagggcttgtggatgtg
cagcaagaagaggcttttagtgacattgttgttgtgaaaggtccaaagtgggaggaaatg
gttttttgcttgggaaggcatgttaaatga
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