Gossypium arboreum (tree cotton): 11540285 Help Entry 11540285          CDS       T05776                                  Symbol rpoB, GoarCp013 Name (RefSeq) RNA polymerase beta subunit   KO K03043   DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Organism gab  Gossypium arboreum (tree cotton) Pathway gab03020   RNA polymerase Brite KEGG Orthology (KO) [BR:gab00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     11540285 (rpoB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:gab03021]     11540285 (rpoB)    03400 DNA repair and recombination proteins [BR:gab03400]     11540285 (rpoB) Enzymes [BR:gab01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      11540285 (rpoB) Transcription machinery [BR:gab03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      11540285 (rpoB) DNA repair and recombination proteins [BR:gab03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       11540285 (rpoB) SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1 RNA_pol_Rpb2_45 Atg11_middle Motif Other DBs NCBI-GeneID:  11540285 NCBI-ProteinID:  YP_005088991 UniProt:  H2B845 LinkDB All DBs Position Pltd:complement(24450..27662) Genome browser AA seq 1070 aa AA seqDB search MLGDENGEMSTIPGLNQIQFEGFCGFMDRGLTEELYKFPKIEDTEQEIEFQLFVETYQLV EPLIKERDAVYESLTYSSELYVSAGLIWKTSKDMQEQTIFIGNIPLMNSLGTSIVNGIYR IVINQILQSPGIYYRSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISI LVLSSAMGSNLREILENVCYPEIFLSFLTDKEKKKIGSKENAILEFYQQFSCVGGDPVFS ESLCKELQKKFFQQRCELGRIGRRNMNQRLNLNIPQNNTFLLPRDILAAADRLIGMKFGM GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENVVRGTICGAIRHKLIPTPQNLVTSTP LTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTANFRIRDIHPSHYGR ICPIDTSEGINVGLIGSLAIHARIGHWGSLESPFYKIFERSKKAQMLYLSPSRDEYYMVA AGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN RALMSSNMQRQAVPLSRSEKCIVGTGLERQVALDSGVPAIADHEGKIISTDTDKIILSGN GDALGIPLVMYQRSNKNTCMHQTARVRRGKCIKKGQILADGAATVGGELALGKNVLVAYM PWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITNEIPHLEAHLLRNL DKNGIVMLGSWVETGDILVGKLTPQVAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG GRGRVIDVRWVQKKGGSSYNPETIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMP YLQDGRPVDMVFNPLGVPSRMNVGQLFECSLGLAGSLLDRHYRIAPFDERYEQEASRKLV FSELYQASKQTANPWVFEPEYPGKSRIFDGRTGGPFEQPVIIGKPYILKLIHQVDDKIHG RSSGHYALVTQQPLRGRSKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVL GTTIIGGTIPKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA NT seq 3213 nt NT seq  +upstreamnt  +downstreamnt atgctcggggatgaaaatggggaaatgtctacaatacctgggttgaatcagatacaattt gaaggattttgtgggttcatggatcggggcttaacagaagaactttataagtttccaaaa attgaagatacagagcaagaaattgaatttcaattatttgtggaaacatatcaattggtg gaaccgttgataaaagaaagggatgctgtatatgaatcactcacatattcttctgaatta tatgtatccgcaggattaatttggaaaaccagtaaggatatgcaagaacaaacaattttt attggaaacattcctttaatgaactccctcggaacttctatagtaaatggaatatacaga attgtgatcaatcaaatattgcaaagccccggtatctattatcgatcagaattggatcat aacggaatttcggtctatactggtaccataatatcagattggggagggaggttagaatta gagattgatagaaaagcaaggatatgggctcgtgtaagtaggaaacagaaaatatctatt ctagttctatcatcagctatgggttcgaatctaagagaaattctagagaatgtttgctac cctgagattttcttgtctttcctgaccgataaggaaaaaaaaaaaattgggtcaaaagaa aatgccattttggagttttatcaacaattttcttgtgtaggcggggatccggtattttct gaatccttgtgtaaggaattacaaaagaaattctttcagcaaagatgtgaattaggaagg attggtcgacgaaatatgaaccagagattgaatcttaatatacctcagaacaatacattt ttgttaccgcgagatatattggcagctgcggatcgtttgattggaatgaaatttggaatg ggtacacttgacgatatgaatcatttgaaaaataagcgtattcgttctgtagcggatctc ttacaagatcaattcggattggctctggttcgtttagaaaatgtagttagaggaactata tgcggagcaattaggcataaattgataccgactcctcagaatttggtaacttcgactcca ttaacaaccacttatgaatcctttttcggattacacccattgtctcaagttttggatcga acaaatccattgacacaaatagtgcatgggagaaaattgagttatttgggccccggagga ttgaccgggcgaactgctaattttcggatacgagatatccatcctagtcactatggacgc atttgcccaattgacacgtctgaagggatcaatgttggacttatcggatccttagcaatt catgccaggattggtcattgggggtctctagaaagtccattttataaaatctttgagaga tcaaaaaaagcacagatgctttatttatccccaagtcgagatgaatattatatggtagcg gcaggaaattctttggccttgaatcagggtattcaggaagaacaggttgttccggctcga taccgccaagaattcctgactattgcatgggaacaagttcatcttcgaagtatttttcct tttcaatatttttctattggagcttccctcattccttttatcgagcataatgacgcgaat cgggctttaatgagttctaatatgcaacgccaagcagttccgctttctcgttccgagaag tgcattgttggaactgggttggaacgccaagtggctctagattcaggagttcccgctata gccgatcacgagggaaagatcatttccaccgatactgacaagattattttatcgggcaat ggagatgctctaggcattccattagttatgtatcaacgttccaacaaaaatacttgtatg catcaaactgcccgggttcggcggggtaaatgcattaaaaaggggcaaattttagcggac ggtgccgctacggttggtggcgaactcgctttgggcaaaaacgtactagtagcttatatg ccatgggaaggttacaattttgaggatgcggtactcattagcgagcgtctagtatatgaa gatatttatacttcttttcacatacgaaaatatgaaattcagactcatgtgacaagccaa ggtcctgaaagaatcactaacgaaataccgcacctagaagcccatttactccgcaattta gacaaaaatggaattgtgatgctgggatcttgggtggagacaggcgatattttagtaggt aaattaacgcctcaggtggcgaaagaatcatcgtatgctccagaagatagattattacgg gccatacttgggattcaggtatccacttcaaaggaaacctgtctaaaattacctataggt gggaggggtcgagtcatcgatgtgagatgggtccagaaaaaagggggttctagttataat ccggaaacgattcgtgtctatatttcacagaaacgcgaaatcaaagtaggcgataaagta gccggaaggcatggaaataaagggatcatttcaaaaattttacctagacaggatatgcct tatttgcaagacggaagacctgttgatatggtcttcaacccattaggagtaccttcacga atgaatgtaggacagctatttgaatgctcgcttgggttagcagggagtctactagataga cattatcgaatagcaccatttgatgagagatatgaacaagaggcttcgagaaaactagtg ttttccgaattatatcaagccagtaagcaaacagcgaatccatgggtatttgaacccgaa tatccaggaaaaagccgaatatttgatggaagaacgggaggcccctttgagcaacctgtt ataataggaaaaccttatatcttgaaattaattcatcaagttgatgataaaatacatggg cgttccagtggacattatgcacttgttacacaacaaccacttagaggaaggtccaagcaa ggaggacaacgggtaggagaaatggaggtttgggctctagagggatttggtgttgctcat attttacaagaaatgcttacttataaatctgatcatattagagctcgccaagaagtactt gggactacgatcattggaggaacaatacctaaacccgaagatgctccagaatcttttcga ttgctcgtccgagaattacgatctttggctctggaactgaatcatttccttgtatctgag aagaacttccagattaataggaaggaagcttaa

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