Gossypium arboreum (tree cotton): 128279236
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Entry
128279236 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC128279236
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128279236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gab03021
]
128279236
03019 Messenger RNA biogenesis [BR:
gab03019
]
128279236
Transcription machinery [BR:
gab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
128279236
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
128279236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
128279236
NCBI-ProteinID:
XP_052880970
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MPLLNNVGFMNGANQQFPTQNNSTGFPQIGPIFPNMNNLAMFQQLPAQFNNSLHNPNQPN
WLNLPQQNNMGLTNGQQQRQQLQQQQLFLQNQLQNVSQLLNAQLPDLSQFVSGGQAIVPN
PHFGFMQPNQMQQQANQSQQNLADVNASNLSSAPASQVPGDPSFRRPKGGPGKNSQNMNN
FPGRNAKRDSKWGSQKSKFDQPRFHQADNAKRAFASSNGHKKKGPDNERAAKFPHSNSAN
PAKEKRRSLALTYTEEEIRKWREERKKFYPTKANIKKKLSGKVADSEVAKSRSEQLKEIL
AKQAELGVEVAEIPPQYLRGMEKRVNGREENHRPSTKRGRFGMRNDKRGRPDKRDHFSKK
PKPTTEESFDGSSFSKRSPTLLQKLLSADIRKDKSRLLQVLRFMVMNSFFKDWPEKPLKF
PVVVVKDGVSEGEIVQENLA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgccattgctaaataatgttggattcatgaatggagctaaccagcagtttcctacacaa
aataacagtacggggtttcctcaaattggtccaattttcccaaacatgaacaatcttgca
atgttccaacaacttcctgctcaattcaataactctttgcataatccaaatcagccaaat
tggttgaatttgcctcaacaaaataatatgggtttaacaaatgggcagcagcagcggcaa
caactacagcaacaacagctttttttacagaaccaattgcagaatgtgagccaacttttg
aatgctcaactcccagatctctcacagtttgtttctggtggccaagccattgtgccgaat
ccgcatttcgggtttatgcagccaaaccagatgcagcagcaagccaatcagagtcagcaa
aatttagcggatgttaatgcatcgaatttgtcttctgcacctgcttcacaagtaccagga
gacccttctttcagaaggccaaagggtggtcctggtaaaaacagtcagaatatgaacaac
tttccaggaagaaatgctaaaagggattcaaaatggggatctcagaagtctaagttcgat
cagcctcggttccatcaagcggataatgcaaagagagcgtttgcatcttctaatggacat
aagaaaaaagggcctgataatgagagggcagctaaatttcctcattctaattctgcaaac
ccagctaaagaaaagagaagatcgcttgctttgacctatacggaggaagagataagaaag
tggcgtgaagaacgtaagaagttctatcccacaaaagccaacataaagaagaaactgagt
ggaaaagtagctgactctgaggttgcaaaatcacgtagcgagcaactcaaggagattttg
gcaaagcaagctgagttaggagtcgaagttgcagaaattccaccacagtatctgcgaggt
atggagaaaagggtgaatggaagggaagaaaaccataggccgtcaaccaagagggggaga
tttggaatgaggaatgataaaagagggagaccagataagagagaccatttttccaagaaa
ccaaaaccaacaaccgaggaatcatttgatggcagttctttcagcaagaggagtccgacc
cttttgcaaaaacttcttagcgctgatataaggaaagataaaagccgattgttgcaggtt
ctccgcttcatggttatgaattcgttctttaaggattggcctgagaagcccttgaaattt
cctgtagtagttgttaaagatggtgtatccgagggtgagattgttcaagaaaaccttgct
tga
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