Gossypium arboreum (tree cotton): 128288348
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Entry
128288348 CDS
T05776
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase subunit beta'-like
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
128288348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gab03021
]
128288348
03400 DNA repair and recombination proteins [BR:
gab03400
]
128288348
Enzymes [BR:
gab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
128288348
Transcription machinery [BR:
gab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
128288348
DNA repair and recombination proteins [BR:
gab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
128288348
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Motif
Other DBs
NCBI-GeneID:
128288348
NCBI-ProteinID:
XP_052880808
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MNQNFSSMIDRYKHQQLRIGSVSPQQISAWAKKILPNGETVGEVTKPYTFHYKTNKPEKD
GLFCERIFGPIKSGICACGNYRVIGNQKEGPKFCEQCGVEFVDSRIRRYQMGYIRLACPV
THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPIAKKPTFLRLRGSFEYEIQSWKY
SIPLFFTTQGFDTFRSREISTGAGAIREQLADLDLRILIDYSVVEWKELGEEGLTGNEWE
DRKXGRRKDFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDIN
ELYRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVY
KSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRG
LIRQHLAPNIGVAKSKIREKGPIVWEILQEVMRGHPVLLNRAPTLHRLGIQAFQPILVEG
RAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQ
DMLIGLYVLTSGNRRGICANRYNPWNRKSYQNERIDDNNYKSTRSLFCNSYDAIGAYRQK
RINLDSPLWLRWRLEQCVIASREAPIEVHYESSGTYHEIYGHYLIVRSLKKKILCIYIRT
TVGHISLYREIEEAIQGFFRAYSYDTQSYGI
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaatttttcttctatgatcgaccgatataaacatcaacaactccgaattgga
tcagtttctccccaacaaataagtgcttgggccaagaaaatcctacctaatggagaaacc
gttggagaggtgacaaaaccctatacttttcattacaaaaccaataaaccggaaaaggat
ggattattttgtgaaagaatttttggacctataaaaagtggaatttgcgcttgtggaaat
tatcgagtaattggaaatcaaaaggagggccctaaattttgtgaacaatgcggagttgaa
tttgttgattctcggatacgaagatatcaaatgggatacataaggctggcatgtccagta
actcatgtatggtatttgaaacgtcttcctagttatatcgccaatcttttagacaaacct
cttaaagaattagagggtctagtatactgcgatttttcttttgctaggcccatcgctaaa
aaacctactttcttacgattacgaggttcattcgaatatgaaattcaatcctggaaatac
agtatcccacttttttttactacccaaggtttcgatacatttcgaagtcgcgaaatttct
accggagcaggtgctattcgagaacaattagccgatctagatttgcgaattcttatcgat
tattcggtggtagaatggaaagaattaggagaagaaggcctcacgggtaatgaatgggaa
gatcgaaaanttggaagaagaaaggattttttggttagacgcatggaattggctaagcat
tttattcgaacaaatatagaaccagaatggatggttttatgtctattaccggttcttcct
cccgagttgagaccgatcattcagatagatgggggtaaactaatgagttcggatattaat
gaactctatagaagagttatctatcgaaataatactcttaccgatctattaacaacaagt
agatctacgccaggggaattagtaatgtgtcaggaaaaattggtacaagaagccgtggat
acacttcttgataatggaatccgcggacaaccaatgagggacggtcataataaggtttac
aagtcgttttcagatgtaattgaaggcaaagagggaagatttcgcgagactttgcttggc
aaacgagtcgattattcgggacgttctgtcattgttgttggcccctcactttcattacat
cgctgtggattgcctcgcgaaatagcaatagagcttttccagacatttgtaattcgcggt
ctaattagacaacatcttgctccgaacataggagttgctaagagtaaaattcgggaaaaa
gggccgattgtatgggaaatactgcaagaagttatgcggggacatcctgtattgttgaat
agagcgcctactctgcatagattaggtatacaggcattccaacctattttagtggaagga
cgcgctatttgtttacatccattagtttgtaagggattcaatgcagactttgatggggat
caaatggcagttcatgtacctttatctttagaggcgcaagcggaggctcgtttacttatg
ttttctcatatgaatctcttgtctccagctattggggatcccatttccgtacctactcaa
gatatgcttattgggctctatgtattaacgagtgggaatcgtcgaggtatttgtgcgaat
aggtataatccatggaatcgaaaaagctatcaaaatgaaagaattgacgataataactat
aagtctacaaggagccttttttgtaattcctatgatgcgattggagcttataggcagaaa
agaatcaatttagatagtcctttgtggctccggtggcgactagagcaatgcgttattgct
tcaagagaagctcccatcgaagttcactatgaatcttcgggtacctatcatgagatttat
ggacattatctaatagtaagaagtttaaaaaaaaaaattctttgtatatacattcgaacc
actgttggtcatatttctctttaccgagaaatcgaagaagctatacaagggttttttcgg
gcctactcatatgatacccaatcatatggtatctaa
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