KEGG   Gossypium arboreum (tree cotton): 128288352
Entry
128288352         CDS       T05776                                 
Name
(RefSeq) LOW QUALITY PROTEIN: photosystem II CP43 reaction center protein-like
  KO
K02705  photosystem II CP43 chlorophyll apoprotein
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab00195  Photosynthesis
gab01100  Metabolic pathways
Module
gab_M00161  Photosystem II
gab_M00611  Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:gab00001]
 09100 Metabolism
  09102 Energy metabolism
   00195 Photosynthesis
    128288352
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   00194 Photosynthesis proteins [BR:gab00194]
    128288352
Photosynthesis proteins [BR:gab00194]
 Photosystem and electron transport system
  Photosystem II (P680 chlorophyll a) [OT]
   Main subunits
    128288352
SSDB
Motif
Pfam: PSII Photo_RC
Other DBs
NCBI-GeneID: 128288352
NCBI-ProteinID: XP_052880811
LinkDB
Position
Unknown
AA seq 809 aa
MTIALGKXTKDENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWY
THGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGA
FGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIF
RFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQ
AEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFV
SQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNLFNGTLALA
GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQ
GLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESF
PFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTL
SPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICIFGGIWHILTKPFAWARRAL
VWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRL
GANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDI
QPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWH
AGRARAAAAGFEKGIDRDFEPVLSMTPLN
NT seq 2430 nt   +upstreamnt  +downstreamnt
atgactatagcccttggtaaanttaccaaagatgaaaatgatttatttgatattatggat
gactggttacgtagggaccgtttcgtttttgtaggttggtccggcctattgctctttcct
tgtgcctatttcgctctagggggttggtttacaggtacaacctttgtaacttcgtggtat
actcatggattggccagctcctatttggaaggctgcaatttcttaaccgccgcagtttct
acccctgctaatagtttagcacattctttgttgttactatggggtcctgaagcacaagga
gattttactcgttggtgtcaattaggtggtctgtggacatttgttgctcttcacggcgct
ttcggactaataggttttatgttacgtcaatttgaacttgcgcgatctgttcaattgcga
ccttataacgcaatcgcattctctggtccaattgctgtttttgtttctgtattcctgatt
tatccactaggtcagtctggttggttctttgcgcctagttttggtgtagcagctatattt
cgattcatcctctttttccaaggatttcataattggacattgaacccatttcatatgatg
ggagttgccggtgtattgggcgcggctctgctatgcgctattcatggtgctaccgtagag
aatactttatttgaagatggtgatggtgcaaatacattccgtgcttttaacccaactcaa
gccgaagaaacttattcaatggtcaccgctaaccgcttttggtcccaaatctttggggtt
gctttttccaataaacgttggttacatttctttatgttatttgtaccagtaaccggttta
tggatgagtgctcttggagtagtcggtctggctctgaacctacgtgcctatgacttcgtt
tcccaggaaatccgtgcagcagaagatcctgaatttgagactttctacaccaaaaatatt
cttttaaacgaaggtattcgtgcttggatggcggctcaagatcagcctcatgaaaacctt
atattccctgaggaggttctaccccgtggaaacctctttaatggaactttagctttagcc
ggtcgtgaccaagaaaccaccggtttcgcttggtgggccgggaatgcccggcttatcaat
ttatccggtaaactattgggggctcatgtagcccatgccggattaatcgtattctgggcc
ggagcaatgaacctattcgaagtggctcattttgtcccagaaaaacccatgtacgaacaa
ggattaattttacttccccacctagctactctaggctggggggtaggtcctggcggagaa
gttatagacacctttccatactttgtatctggagtacttcacttaatttcctctgctgta
ttgggctttggcggtatttatcatgcacttctgggacctgaaactcttgaagaatctttt
ccatttttcggttatgtatggaaagatagaaataaaatgaccacaattttgggtattcac
ttaattttgctaggtataggtgcttttcttctagtattcaaggctctttattttgggggc
gtatacgatacctgggctccgggagggggagatgtaagaaaaattaccaacttgactctt
agcccaagtgttatatttggttatttactaaaatcgccctttggaggcgaagggtggatt
gttagtgtggacgatttggaagatataattggaggacatgtatggttaggttccatttgt
atatttggtggaatctggcatatcttaaccaaaccttttgcatgggctcgccgtgcactt
gtatggtcgggagaggcttacttgtcttatagtttaggtgctttatccgtttttggtttc
attgcttgttgctttgtctggttcaataataccgcttatcctagtgagttttacgggccc
actggaccagaagcttctcaagctcaagcatttacttttctagttagagaccaacgtctt
ggggctaacgtgggatccgctcaagggcctactgggttaggtaaatatctaatgcgttcc
ccgaccggagaagtcatttttggaggggaaactatgcgtttttgggatctgcgtgctcct
tggttagaacctctaagaggtcccaatggtttggacttgagtaggttgaaaaaagacata
caaccttggcaagaacggcgttctgcggaatatatgacgcatgctcctttagggtcttta
aattctgtaggtggcgtagctaccgagatcaatgcagttaattatgtctctccgagaagt
tggttagctacctctcattttgttctaggattcttcctattcgtgggtcatttatggcac
gcgggaagagctcgcgcagccgcagcgggatttgaaaaaggaattgatcgtgattttgag
cctgttctctccatgactcctcttaactga

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