Glycocaulis abyssi: AB6B38_00265
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Entry
AB6B38_00265 CDS
T10778
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
gaby Glycocaulis abyssi
Pathway
gaby00470
D-Amino acid metabolism
gaby00550
Peptidoglycan biosynthesis
gaby01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gaby00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AB6B38_00265 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AB6B38_00265 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gaby01011
]
AB6B38_00265 (murD)
Enzymes [BR:
gaby01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
AB6B38_00265 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
gaby01011
]
Precursor biosynthesis
Amino acid ligase
AB6B38_00265 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
2-Hacid_dh_C
NAD_binding_2
TrkA_N
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
XER17367
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All DBs
Position
58627..60042
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AA seq
471 aa
AA seq
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MIPVTAYKGRRVAVFGLGRTGITAARALLAGGAEVSAWDDNEAAREAAIKAGLELDDLNR
RDWGDMAALVLSPGIPLTHPAPHRMVSLARAVGAPVIGDVELFAQAIAETPGVTVIGVTG
TNGKSTTTALIGHILKSAGRDVRVGGNIGDAVLGLEPPRPGAIYVLELSSYQLDLIESLR
CRVAVFLNLTPDHIDRHGDIDGYRLAKERIFANQQDGDTAIVGVDDEPSRSVCTRLKSRA
GLNVIPVSSQRLVSFGVYALAGKLYDETAGGGGARTVMELHRAQALPGSHNAQNAAAAYA
AVRALGVSISDAVAGIASFPGLPHRQERVGEAGSLLFINDSKATNAEAAAQALGCYHDIF
WIAGGQAKSGGIESLQPFFRRVRKAYLIGQDAALLRKQLGNAVPHDMSGTLERALQNAAM
DAAESGYRRPVVLLSPACASFDQFKSYEHRGDTFRALVKDLLERATKGDAA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgatccctgttaccgcctacaagggccgccgcgtggcggtgttcggcctcggccgcacc
gggatcactgctgcgcgggccctgctggccggcggggcggaggtatccgcctgggatgat
aatgaggcggcgcgcgaagcggccatcaaggccgggctggagctggatgatctcaaccgg
cgcgactggggggatatggcagccctggtattgtctcccggcataccgctgacccacccc
gcgcctcaccgcatggtctcgctggccagggcggtgggggcgcctgtcattggggatgtc
gaactgttcgcgcaggccatcgccgaaacgcccggcgtcacggtgatcggcgttaccggc
acgaacggcaaatccaccacgacggcgctgatcggccatatcctgaaaagcgcagggcgt
gatgtgcgcgtgggcggcaatatcggggatgcggtgctggggctggagccgccgcgtccg
ggcgcgatctacgtgctggagctgtcctcctaccagcttgacctgatcgaaagcctgcgc
tgccgggtggcggtgtttttgaatctcacgccggatcatatcgaccggcatggcgatatt
gatggctatcgcctggccaaggagcgcatttttgccaatcagcaggacggcgatacggcg
attgtcggcgtcgatgatgagcccagccgcagcgtgtgtacgcgcctgaaatcgcgcgcc
ggtctcaatgtcatcccggtatccagccagcggctggtatcgtttggagtctatgcgctg
gccggcaagctttatgacgagacggcaggcggcggcggtgcgcgcacggtcatggagctg
caccgcgcacaggcgcttcccggttcgcacaatgcccagaacgccgccgccgcttacgcc
gccgtacgggcgcttggggtgagcatttcagatgcggtggcgggcattgccagctttccc
ggcctgcctcaccggcaggaacgtgtgggtgaggcgggctcgcttctcttcatcaacgat
tccaaggcgaccaatgccgaggcggctgcgcaggcgctgggctgctatcacgacatattc
tggattgcgggcgggcaggccaaatccggcgggattgaaagcctgcagcccttcttccgg
cgcgtccgcaaagcctatctgatcgggcaggatgcggccctcctccgcaagcagctgggc
aatgcagtaccccatgacatgtccggcacgctggagcgcgccttgcagaacgcggccatg
gatgcggctgaaagcggatatcgccggcctgttgtgctgctgtctccggcctgcgcctcg
tttgaccagttcaagagctatgagcatcgcggcgataccttccgcgctctggtgaaagat
cttctggagcgggcaaccaagggggatgcggcatga
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