Glycocaulis abyssi: AB6B38_00290
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Entry
AB6B38_00290 CDS
T10778
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
gaby Glycocaulis abyssi
Pathway
gaby00470
D-Amino acid metabolism
gaby00550
Peptidoglycan biosynthesis
gaby01100
Metabolic pathways
gaby01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
gaby00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AB6B38_00290
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AB6B38_00290
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
AB6B38_00290
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gaby01011
]
AB6B38_00290
Enzymes [BR:
gaby01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
AB6B38_00290
Peptidoglycan biosynthesis and degradation proteins [BR:
gaby01011
]
Precursor biosynthesis
Amino acid ligase
AB6B38_00290
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
ATPgrasp_YheCD
TTL
Motif
Other DBs
NCBI-ProteinID:
XER17372
LinkDB
All DBs
Position
64645..65562
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AA seq
305 aa
AA seq
DB search
MSKRIALLLGGLSPEREVSLVSGRECAKGLRAKGYEVTEIDPANERWVEDIKALKPDLVF
NALHGLWGEDGRIQGVLEYLRIPYTHSGVLASALAMDKQKTKAVLRLAGLNCPDGLIASR
FDAAREHLIAAPYVAKPNDQGSSVGVLIVREGANRPPAELAADSWPYGDDILIEKFIPGR
ELTVAVMGERALTVTEIVPKTAFYDYEAKYADGGSVHRLPADIPGDVFDKAMEAAVIAHR
ELGCRGLTRSDFRWDESGDGKLWLLEINTQPGMTPTSLAPEQAAHCGIGFPDLVAWIAED
ASCQR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcgcatcgcccttctgctcgggggcctcagccctgaacgcgaggtctcgctg
gtttcgggccgtgaatgcgccaaggggctgcgtgccaagggttatgaggtgacggagatc
gaccccgcgaacgagcgctgggttgaggacatcaaggcgctcaaacccgatctcgtgttc
aacgcgctccatgggctgtggggcgaagatggccgcatacagggtgtgctggaatatctg
cgcatcccctacacccattccggcgtgctggcctcggctctggcgatggacaagcagaag
accaaggcggtgttgcgccttgcgggcctcaattgccctgacgggctgatcgccagccgg
tttgacgccgcgcgcgagcatctcattgctgcgccctatgtcgccaagcccaacgatcag
ggatcgtcggtgggtgtgctgatcgtgcgcgagggggcgaaccgcccgcctgcggagctg
gccgccgacagctggccctatggtgatgacatcctcatcgagaagttcattcccggccgg
gagctgaccgtcgccgtgatgggtgagcgcgcgctgaccgtcaccgagatcgtgccgaaa
acggctttttatgattatgaggcgaaatacgccgatggcgggtcggtgcaccgtctgccc
gccgacattccgggcgatgtctttgacaaggcgatggaagcggcggtcatcgcgcatcgc
gagctggggtgtaggggcctcacgcgatctgatttccgctgggatgagagcggggatggc
aagctttggttactcgaaattaatacccagccgggcatgactcccacatcgcttgcgccc
gaacaggcggcgcattgcggtatcggatttcccgaccttgtcgcgtggatagcggaggac
gccagttgccagaggtga
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