Glycocaulis abyssi: AB6B38_00560
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Entry
AB6B38_00560 CDS
T10778
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
gaby Glycocaulis abyssi
Pathway
gaby03030
DNA replication
gaby03430
Mismatch repair
gaby03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gaby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB6B38_00560
03430 Mismatch repair
AB6B38_00560
03440 Homologous recombination
AB6B38_00560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gaby03032
]
AB6B38_00560
03400 DNA repair and recombination proteins [BR:
gaby03400
]
AB6B38_00560
Enzymes [BR:
gaby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB6B38_00560
DNA replication proteins [BR:
gaby03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AB6B38_00560
DNA repair and recombination proteins [BR:
gaby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AB6B38_00560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_30
AAA_5
AAA_16
AAA_14
AAA_19
AAA_18
AAA_assoc_2
RCF1-5-like_lid
AAA_24
DUF815
TsaE
SRP54
ABC_tran
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
XER17422
LinkDB
All DBs
Position
120327..122105
Genome browser
AA seq
592 aa
AA seq
DB search
MDDQDPDSGALALSEDEPGPALPGFEPPPASSAYQVLARKYRPQRFSDLIGQDAMVRTLS
HAFQSGRIAQAYMLTGVRGVGKTTTARLIARALNYESDERSGPSVDIDPPGRHCDAIARS
AHVDVLEMDAASRTGVGDIREILDGVRYAPVSAPYKVYIIDEVHMLSNNAFNALLKTLEE
PPPHVKFIFATTEIRKVPVTVLSRCQRFDLRRVPRDALSAHLKNICDQEGAEVEADGLDA
IARAAEGSVRDALSLLDQAIVQGSETGPVPASQVREMLGLVDRSRVLDLLDAALTGKGEA
ALSELESQYAAGADPQVLMRDLLDYLHAMNRVKATGGKADVAEAPETAARLRELADTHSL
ASLTRLWKTALSGLDDVRSAPDPMAAVEMSVIRLMAAASLPGPEDAARLIAALEAGAPLP
AQTSQAGADSNAPSAQADTPDGPEESEPAISSDPSSLEDVLALLDREREVLLRDQVERYV
RLVSIGQGKLVFEAAKGAPDDLASRLAGFLHAQTGARWLVDSQGRAPGGETMRERRRREA
EALREQALRDPAIVRAMTLFPGAELESVTAVEPDPSPTQMSDAETQRQERKP
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggatgaccaggatccagacagcggcgcgcttgcgctgagtgaagatgagccggggccg
gccctgccgggctttgagccgccgcctgccagctccgcctatcaggttcttgcccgcaaa
taccgcccgcaacgcttttccgatctgatcgggcaggacgccatggtgcgtacgctgtcc
catgccttccagtcgggccgcatcgcgcaagcctatatgctgaccggggtgcgcggggtg
ggcaaaacaacaaccgcgcgccttatcgcccgcgcactgaactacgaatcggacgagcgc
tccggccccagcgtggatattgatccgcccggccgccattgcgatgccatcgcccgctcg
gcccatgtcgacgtgctggagatggacgcggcgtcgcgcaccggcgtcggcgatatccgt
gaaatcctcgatggtgtgcgctatgcgccggtgtcggccccttacaaggtctacattatc
gacgaagttcacatgctgtcgaacaatgcgttcaatgcattgctcaaaacgcttgaagag
ccgccgccgcatgtgaagttcatcttcgcgacgaccgagatacgcaaagtgccggtcacg
gtccttagccgttgtcagcgctttgatctgcgccgcgtgccgcgcgatgcgctgagtgcg
catctgaagaatatctgcgatcaggaaggcgccgaggttgaggctgacggccttgacgcg
attgcccgtgccgccgaaggctctgtgcgcgacgcgctctccctgctcgatcaggccata
gttcagggcagtgagaccggcccggttccggcttcgcaggtgcgtgaaatgctgggcctg
gtggaccgttcgcgcgtgctcgatctgctggatgccgccctgacaggcaagggcgaagcg
gcgctctccgagctggaaagccagtatgcagcaggcgctgatccgcaggtgctgatgcgg
gacctgctggattacctgcatgccatgaaccgggtgaaggcgacaggcggcaaggcagac
gtcgccgaagcgccggagaccgccgcgcgcctgcgcgagttggccgatacacattcgctt
gcgagcctcacccgtctatggaagacggcgctgtccggacttgatgatgtgcgctccgcg
cccgatccgatggcggccgtagagatgagcgtgatacgcctgatggcggctgccagcctg
ccggggccggaagatgcggctcgcctgatcgcggcgctggaggcgggtgcgcccctgcct
gcccagacatcgcaggctggcgcagacagcaatgcaccctccgcgcaggcagacactcca
gatggtcctgaagagtctgagccggccatcagttccgatccgtcgagccttgaggatgta
ctggcgctgctggaccgcgagcgcgaagtgctgctgcgcgatcaggtggagcgctatgtg
cgccttgtgtccatcgggcagggcaagctggtgtttgaagcggcaaagggtgcgccggac
gatctggccagccgccttgccggtttcctgcatgcccagaccggcgcgcgctggctggtg
gatagtcagggccgggcaccgggcggagagacgatgcgcgagcgccgccgccgagaggcc
gaggcgcttcgtgagcaggcattgcgtgatccggccattgtccgcgcgatgacgctcttt
cctggcgcggaactggaatcggttacagcggttgagccagatccttctcctacccagatg
tcggacgcagaaacccagcgtcaggagcgcaaaccatga
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