Glycocaulis abyssi: AB6B38_00700
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Entry
AB6B38_00700 CDS
T10778
Symbol
gspD
Name
(GenBank) type II secretion system secretin GspD
KO
K02453
general secretion pathway protein D
Organism
gaby Glycocaulis abyssi
Pathway
gaby03070
Bacterial secretion system
Brite
Secretion system [BR:
gaby02044
]
Type II secretion system
General secretion pathway protein
AB6B38_00700 (gspD)
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GFIT
Other DBs
NCBI-ProteinID:
XER17450
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Position
149276..151204
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AA seq
642 aa
AA seq
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MMYRIAAFIAGFVLLAGVSAAQSEERTTLNFRNADMTAFIEDMAALTGYTFVVDPQIRGV
VTITSQGPVTRDEAFQVFLATLRVHGFSAVPTAPGVYQIRAEREGARSGAPLGGDDGLFN
SSVVRLQSASAREAVRTLGAMSSAVGTLTALESGNSVVIVDYASNVAAIEQALRALDRDS
TVVEMVSLENVSADEMARIIERLRQPAFQGEDNRRFALNIAPVPASNTLLIRGEMNAVQD
IIALIRRVDAVSRSNQSFRVIALNHADGAALLPILEQVSVSLTPADSEGGAARRASIAHH
APTNTIVVNADPDQLRELELVIRQLDVRRPQVLVEAIIVEISDQTARDLGLQLLLSGNAG
SSTPFLTTRYGASPDILAVAGGLTARGDDDASDSLRETAIQSLLRSSGALIGVGGQNSNG
AIFGAILNALEADTSSNILSKPSILTLDNEEASIIVGQQIPITTGEVLGSNNSNPFRTIE
RQDVGVQLRVQPQISDGDTIRLHLRQEVSSVAGPVSQTFAELVTNNRAIETTVLADNGEI
IVLGGLIERDEQVADSGVPGLRRIPVLGRAFRNEGRSDRRTNLVVFIRPTIVRSAADMRA
LALEAYASASEEQRRATNGRGSSLEDVVRMMMDAPSAPADGQ
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgatgtaccgtattgccgccttcatcgcgggatttgtcctgcttgccggggttagcgcc
gcgcagagcgaggaacgcaccacgctcaatttccgcaatgcggacatgacagccttcatc
gaggatatggccgcgctgaccggctatacattcgtggtcgatccgcagatacgcggcgtt
gtcaccattacctcgcaagggccggttacgcgcgacgaggcgtttcaggttttcctcgcc
accttgcgcgtgcatggtttcagcgctgtgccgacagcacccggtgtttaccagatccgc
gcagagcgcgaaggcgcgcgttccggcgcgcctctcgggggcgatgacggcctgttcaat
tcatccgtcgtgcgcctgcaatcggccagtgcgcgcgaagcggtgcgcacgctgggggcc
atgtcgagcgcggtaggtacgctgaccgcgttggaaagcggcaattctgtcgtgatcgtc
gactatgcgtccaatgtggccgccatcgagcaggccctgcgcgcactcgaccgcgacagc
acggtcgtggaaatggtgtcgctggaaaacgtctcggcggacgagatggcccgcattatc
gagcgcctgcgccagcctgccttccagggcgaggataatcgccgcttcgcgctcaatatc
gcgcctgtgccggcgtccaacacgctgctgatccgcggcgagatgaacgctgtccaggac
attattgcgctcatccgccgtgtagatgcggtcagccgctccaatcagagcttccgcgtg
atcgccctgaaccacgctgatggcgcggccctcctgccaatcctggaacaggtttcggtc
agcctgacgccggccgacagtgagggcggggcggcgcgccgcgcctccatcgcccatcac
gcgcccaccaacacgattgtggtcaatgccgatcctgatcagctgcgcgagctggaactg
gtgatccgtcagcttgatgtacgccgcccgcaagtgctggtcgaagccatcatcgtggag
atttcagaccagaccgcgcgcgatctcggcctgcaacttcttctgtccggcaatgcgggc
agctccacgcccttcctgacgacacgctatggcgcttcgcccgacattctcgcggtcgcg
ggcgggctcactgcacgcggcgatgatgacgcatctgacagcttgcgcgagacggcgatc
cagtcgctgctgcgctccagtggcgcgctgatcggggtgggtgggcagaactcgaacggg
gcgatctttggcgcgatcctgaatgcgctggaggccgataccagctcgaatatcctctcc
aagccttcgatcctcacgctcgacaatgaagaagcctccatcatcgtcggccagcagatc
ccgatcacgaccggcgaggtgctggggtcgaacaattccaacccgttccgcaccatcgag
cggcaggatgtgggcgtacagctgcgcgtccagccgcagatttccgatggcgacaccatc
cggctgcatctgcgtcaggaagtgtcatccgttgccgggcccgtcagccagacctttgcc
gagctggtcaccaataaccgcgcgatcgagaccacggtgctggccgataatggcgagatc
atcgtgctgggcggactgatcgagcgcgatgaacaggtcgccgatagcggcgtaccgggc
ctgcgccggataccggttctgggacgcgcttttcgcaatgagggccgctcggaccggcgg
accaatctggtcgtcttcattcgccccaccattgtccgcagcgccgccgacatgcgcgcg
ctggcgctggaagcctacgcgagcgcgtccgaagaacagcgccgggccacgaacgggcgc
gggtcgagccttgaggacgtggtgcggatgatgatggacgcgccgtctgctccggcggac
ggtcaatag
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