Glycocaulis abyssi: AB6B38_01315
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Entry
AB6B38_01315 CDS
T10778
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gaby Glycocaulis abyssi
Pathway
gaby03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gaby00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AB6B38_01315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gaby03021
]
AB6B38_01315
03400 DNA repair and recombination proteins [BR:
gaby03400
]
AB6B38_01315
Enzymes [BR:
gaby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AB6B38_01315
Transcription machinery [BR:
gaby03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AB6B38_01315
DNA repair and recombination proteins [BR:
gaby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AB6B38_01315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
XER18666
LinkDB
All DBs
Position
259743..260762
Genome browser
AA seq
339 aa
AA seq
DB search
MIEKNWQELIRPMKPVVQAGHDAARNAKIVAEPLERGFGMTLGNALRRVLLSSLQGAAVT
AVQIDGVLHEFSSIPGVREDVTDIVLNLKQVALRMHGEGPRRVVLRKSGPGEVTAGDIEE
TADIEVINRDHVICTLDEGASLRFVLTVNTGKGYVPAERNRPEDAPIGYIAIDALYSPVK
RVAYRVENTREGQVLDYDKLILDIETNGAVTPEDAVAYAARILQDQFQIFVNFEEPSEAR
GPEDDAPSLDFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKSESEMLRTPNFGRK
SLNEIKEVLAQMGLHLGMEAPNWPPENIEDLAKKFEDQI
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgagaagaactggcaggaactaatccgtccgatgaagcccgtcgttcaggctggc
catgatgctgcgcgcaacgccaagattgttgccgagccgctcgagcgcggttttggcatg
acgctcggcaatgcgctgcgccgcgtactgctgtcctctctccagggcgcggcggtaacc
gccgtccagatcgacggcgtactccacgagttctcgtcgatcccgggtgtgcgggaagac
gtcaccgacatcgtgctgaacctgaagcaggttgccctgcgcatgcatggcgaaggcccg
cgccgcgtggtgctgcgcaagagcggccccggcgaggtgacggctggcgatatcgaggaa
acggcagacattgaggtcatcaaccgcgatcacgtcatctgcacgctggacgaaggcgcg
agcctgcgcttcgtgctgacggtgaacaccggcaagggctatgtgcccgccgagcgtaac
cgcccggaagacgcgccgatcggctacatcgccatcgacgcgctctacagcccggtcaag
cgcgtggcctaccgcgtggaaaacacccgcgaaggtcaggtgctcgactatgacaagctc
attctcgacatcgagaccaatggcgctgtgacgcctgaggatgctgtggcatatgccgcg
cgcatcctgcaggaccagttccagatcttcgtgaacttcgaggagccttccgaggcccgc
ggcccggaagacgatgcgccgtcgctggacttcaacccggccctcctcaaaaaggtggac
gagctggagctgtctgtgcgctcggcgaactgcctgaagaacgacaatatcgtctacatt
ggcgacctgatccagaaatcggaatcggaaatgctccgcacgccgaacttcggccgcaag
tcgcttaatgagatcaaggaagtgctggcccagatggggctgcacctcggtatggaggcg
cccaactggccgccggagaatatcgaggacctggcaaagaaattcgaggatcagatctag
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