Glycocaulis abyssi: AB6B38_01915
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Entry
AB6B38_01915 CDS
T10778
Name
(GenBank) PAS domain S-box protein
Organism
gaby Glycocaulis abyssi
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
PAS_4
PAS_3
HATPase_c
Response_reg
HisKA
PAS_8
PAS_10
HATPase_c_2
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
XER17680
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Position
372692..376270
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AA seq
1192 aa
AA seq
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MSGDITRDIFFQNHPDPMLIYELATRRILVVNQTFQIRYGYTQDDLKTLRLDDLHPDEEL
EKLESNVAAVSEGLDRAGIWQHRLKSGEFIHVEITSHTMEYKGKACELVVARDMTERVRF
EKERDQALKREEVLRSRAEAAAYHFQSLFESAPGMLLVLEPEDYTIVAISDAYLNATKRR
RSDIMGKPLFDVFPDDPDDPEANGVAAVTAVLERVKDSGLSEALPLVRFPIERPEEEGGG
FEERWWLSVFSAVNGPDGRAQYVICRSEDVTGLIAGQNRDADQLAAELAERPLELDLMVH
SRELREATLRLNEREASIRTVERLLALGQWRFDLQTQKLEWSDSTFRMYGLDPETCEPDY
DLYVSLVHPDDRARMESWFADFIESGERSGEFWHRIVRPDGRVITVRGVAERAITPEGEA
TTGFVQDITGQLETDARLSEADHLLRLAGKSARFGAWRVDLGRGVAEWSEEVADIHDMPG
TRELPVDEAIGFYAPESIDRLREVYEHCINTGEPFDEMLVIISAKGRRVWCRSIGEAERN
AAGEVIAVRGAFQDISELVSARLESAELAERLQNTLNTMSDAFYLLDEGMCFSFVNKEAE
RALRTPRQDLLGKHVWEAFPGAREALEPYYQQAVDTGESANTSFWYDELGVWFRVRVHPG
PDGLAVYFQDITEERQAQEQLYLLEKAVARANDVVVIADSKVTDEGPRIVYVNDAFERVF
GYTRDEVVGQSTSILRGPLTDPETLEEIFAAFRAMAPVRTEIVHYTRSGEGRWMDVAAVP
ITDTEGRHTHWLGVQRDITERKRDEEALRIARDEAEEANRLKSEFLANMSHEIRTPLNGV
LGMSQLLARTDLDARQTRMIETVQTSGKALLSIINDILDLSKIEAGLMTIEPEAVEVDAL
CEQALSSVRGTAQNKALALDLAIDEAVPGHITADRRRLAQVLINLLGNAVKFTEAGSVWL
NVDCPDAQTIRFEVTDTGPGISPQQAEHIFDRFRQVDASYARRHEGTGLGLALSKEFTSL
MGGHITLHSRPGEGSRFAVHLPLVTTRAGADGGHEAANVVSLPKDMGRILVAEDNATNRE
TLEMFLDELGLARPVCVTNGRDAVERALAEDFSLIIMDISMPVMSGLDAIRAIRASTSRR
RDIPILALTAHAALQDREECLQAGANDYLAKPVDLAALASALSKLVSKRAAG
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgatatcacgcgtgacatcttctttcagaatcaccccgaccccatgctcata
tacgagctggcgacgcgccgtattctggtggtcaaccagaccttccagatccgctatggc
tacacgcaggatgatctgaaaaccctgcgccttgatgatctccaccccgatgaggagctg
gagaagctggaatccaacgtggcagcggtcagcgaaggtctcgatcgggccgggatctgg
cagcatcggctcaaatccggcgagttcatccatgtggagatcacctcccatacgatggag
tacaagggcaaggcgtgcgagctggtcgtagcccgtgacatgaccgagcgtgtacgtttc
gagaaggaacgcgatcaggcgctcaagcgcgaggaagttctgcgcagccgtgccgaggct
gcggcctatcatttccagtcgctgtttgaatccgcgccgggcatgctgcttgtgctggag
ccggaggactacaccatcgtggcgatcagcgacgcctatctgaacgccacgaagcgccgc
cggtccgacattatgggcaagccgcttttcgacgtgtttcccgatgatcctgatgaccct
gaggccaatggtgttgctgccgtcaccgctgttctggaacgggtgaaggatagcgggctg
tcggaggccctgccgctggtgcgctttcccattgaacggccagaagaagagggcggcggg
tttgaggagcgctggtggctgtctgtgttttctgccgtcaatggccccgatggccgcgcg
cagtatgtgatctgccggtctgaggacgtgacggggctgattgccggtcagaaccgtgat
gccgaccagctggctgccgagctggcggagcggccgctcgagctcgacctgatggtacat
tcacgcgagctgcgcgaagcgacgctgcggctcaatgagcgcgaagcgagtatacgcacg
gtggagcgcctgctggctctgggccagtggcggttcgacctgcagacccagaagctggaa
tggtcagacagcacgttccggatgtacgggctggacccggagacatgtgagcccgattac
gatctctatgtcagcctggttcaccctgatgaccgcgcaaggatggaaagctggtttgcc
gatttcatcgagtccggtgaacgcagcggcgagttctggcaccgcatcgtgcgccctgat
ggccgcgtgattacggttcgcggtgtcgccgaacgtgccataaccccggagggcgaggcg
accaccgggttcgttcaggacattaccggccagctggaaaccgatgcgcggctgagcgaa
gcagaccatttgctgcgtctggctggcaaatcggcccgttttggcgcctggcgggtggat
ctggggcgtggcgtcgccgagtggtctgaagaagtggcggatatccacgacatgcccggc
acgcgggaactgccggtggatgaggctatcggcttctacgcaccggaaagcattgaccgg
ctgcgggaggtttatgagcactgtatcaataccggagaacccttcgacgagatgctggtc
atcatcagcgcgaagggaaggcgggtctggtgccgctcgatcggtgaagctgaacgcaat
gctgctggggaggtgatcgcggtacgcggcgcgttccaggacatctccgaactggtgtcg
gcccgccttgaaagcgcggagctggccgagcgcctgcagaacacactcaacacgatgagc
gatgccttctacctgcttgatgaggggatgtgtttttccttcgtcaacaaggaggcggag
cgggcgctgcgcacgccgcgccaggacctgctgggcaagcatgtctgggaggcgttcccc
ggcgcacgtgaagcgctggagccctactaccagcaggcggttgatacgggcgagagcgcg
aacacatccttctggtacgatgagcttggtgtgtggttccgggtgagggtgcatcccggc
ccggacggtctggccgtgtattttcaggacatcaccgaggagcggcaggcacaggagcag
ctctatcttctggaaaaggcggtcgcgcgcgccaatgatgtcgtagttatcgccgacagc
aaggtcactgatgaagggcccagaatagtttatgtcaacgacgcattcgagcgggtgttc
gggtatacccgcgacgaggtggttggccaatcaaccagcatattgcgtggtcccctcaca
gacccggagacgctagaggagatatttgcagcgttcagggccatggcgccggtacggacc
gagattgtgcactataccaggtccggcgaggggcgctggatggatgtcgccgcggtgccg
atcaccgatacggaagggcgtcacacgcactggctgggcgtgcagcgcgacattaccgag
cgcaaacgtgacgaggaagcgctccggatcgcgcgcgacgaggccgaagaggccaaccgg
ctgaagtcggagtttctggccaatatgagccacgaaatccgcaccccgctcaacggcgtg
ctggggatgtcgcaattgctggcccgtacggaccttgatgcccgccagacacggatgatc
gagacggtgcagacctctggcaaggcgctgttgtcgatcatcaacgacattctggacctg
tccaagattgaggccggcctgatgaccatcgaaccggaggcggttgaggtcgacgccttg
tgtgaacaggctctgtcgtcggtcaggggtacggcacagaacaaggcgctggcgcttgat
cttgccattgatgaagcggttcccggacacataacggccgaccggcggcgcctggcccag
gttctgattaatctgctgggcaatgcggtaaagttcaccgaggccggatcggtctggctg
aacgtggactgcccggacgcgcaaaccatccgtttcgaggtgaccgataccgggccgggg
atcagcccgcagcaggcggagcatatttttgaccgcttccggcaggtggacgcctcctat
gcccgccggcatgagggtacggggctcggcctggcgctgagcaaggagttcaccagcctg
atgggcgggcatattaccctgcattcccggcccggcgagggttcgcgctttgccgttcat
ctgccgctggtgacgaccagggccggggcggatggcgggcatgaggcggcgaatgtcgtc
agcctgcccaaggacatgggccgtattctcgttgcggaggacaacgcgaccaatcgcgag
acgctggagatgtttcttgatgagctgggcctggcccgcccggtctgcgttaccaatgga
cgcgacgcggtggagcgcgcgctggcggaagatttttcgctcatcatcatggatatttcc
atgcccgtcatgtcagggctggacgcgatccgcgcgatccgggccagcacgtcgcgccgg
cgcgacatacccattctggcgttgacggcacacgccgcgctgcaggatcgcgaagagtgt
ctgcaagcaggcgctaacgattatctcgccaaacctgttgatctcgcggcgctggcgagc
gcattgtcgaaactggtgagcaagcgggctgcaggctga
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