Glycocaulis abyssi: AB6B38_01940
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Entry
AB6B38_01940 CDS
T10778
Name
(GenBank) Lrp/AsnC family transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
gaby Glycocaulis abyssi
Brite
KEGG Orthology (KO) [BR:
gaby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaby03000
]
AB6B38_01940
03036 Chromosome and associated proteins [BR:
gaby03036
]
AB6B38_01940
Transcription factors [BR:
gaby03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
AB6B38_01940
Chromosome and associated proteins [BR:
gaby03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
AB6B38_01940
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
AsnC_trans_reg
HTH_AsnC-type
HTH_IclR
HTH_20
MarR
MarR_2
HTH_11
HTH_Crp_2
TrmB
HTH_28
DUF7343
HTH_CodY
HTH_5
Sigma70_r4_2
NirdL-like_HTH
HTH_1
LexA_DNA_bind
HTH_23
HTH_PafC
Rrf2
Xre-like-HTH
HTH_39
Fe_dep_repress
AbiEi_4
HTH_3
HTH_10
Motif
Other DBs
NCBI-ProteinID:
XER17685
LinkDB
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Position
380447..380953
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AA seq
168 aa
AA seq
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MNLDDTDRALLTLLQAEGRLTNAELAERVGLSPSACHRRVRALEARGVVIGYAALLNADA
VGRGLTVLVLVTLENQRRETMQAFETAVEKVEEVMDCYLTTGAEDYLLRLMVSDARDYER
VHRERLSGLPGVARLISNIAMRKVFTRTALPLAGGQAGSATRKAGSGV
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttgatgatactgatcgcgccctgctgacccttctgcaggccgaaggacgtctg
accaatgcggagcttgccgagcgggtggggctgtcgccttctgcctgtcaccggcgtgtc
cgggcactggaggcgcgcggcgtcgtgatcggatatgctgccctgctgaatgccgatgca
gtagggcgggggctgactgtgctggtgctggtcacgctggagaatcagcgccgcgagacg
atgcaggctttcgagacggcggtggagaaggtggaggaggtgatggactgctacctcacc
accggcgcggaagattatctgttgcgcctgatggtgagcgatgcgcgcgattatgagcgc
gtgcaccgcgagcggctgtccggcctgccgggtgtggcgcgcctcatctccaatatcgcc
atgcgcaaggttttcacgcgcacggccctgccgctggctggcggtcaggccggctcggcc
acccggaaagccgggtccggggtgtaa
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