Glycocaulis abyssi: AB6B38_04450
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Entry
AB6B38_04450 CDS
T10778
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
gaby Glycocaulis abyssi
Pathway
gaby00260
Glycine, serine and threonine metabolism
gaby00460
Cyanoamino acid metabolism
gaby00630
Glyoxylate and dicarboxylate metabolism
gaby00670
One carbon pool by folate
gaby00680
Methane metabolism
gaby01100
Metabolic pathways
gaby01110
Biosynthesis of secondary metabolites
gaby01120
Microbial metabolism in diverse environments
gaby01200
Carbon metabolism
gaby01230
Biosynthesis of amino acids
gaby01240
Biosynthesis of cofactors
gaby04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
gaby00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AB6B38_04450 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AB6B38_04450 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AB6B38_04450 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AB6B38_04450 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AB6B38_04450 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AB6B38_04450 (glyA)
Enzymes [BR:
gaby01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AB6B38_04450 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
XER18162
LinkDB
All DBs
Position
complement(900880..902184)
Genome browser
AA seq
434 aa
AA seq
DB search
MPDAAQETASNGFFTETLASRDPEIASAIAKEIGRQQDQIELIASENIVSRAVLEAQGSP
LTNKYAEGYPGKRYYGGCEFVDIAEELAIERAKKLFDAAYANVQPNSGSQANQAVFLALL
KPGDRILGLDLSAGGHLTHGARPNMSGKWFEAHHYGVRESDALIDYDKLREQALELRPQM
IIAGGSAYPREIDFKKFRAIADEAGALLLVDMAHFAGLAAAGVYPNPVPHADVVTTTTHK
TLRGPRGGMVLSRDVDIGKKINSAVFPGLQGGPLMHVIAGKAVAFGEALRPEFKQYAANV
VENCRAMAGALSDAGYAVVSGGTDSHLALIDLRPKKLTGDISEAALERAHMTCNKNGVPF
DPEKPTVTSGLRIGAPAGTTRGFGVAEFRRVGEMMADVLDALADNRDGDAQVEARVREEV
IAMCKRFPIYPELG
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgccggatgcagcccaggaaaccgccagcaacgggtttttcaccgaaacgctcgccagc
cgggaccccgaaattgccagcgccatcgcaaaggagattggccggcaacaggatcagatc
gagctgatagcctcggaaaatattgtcagccgtgctgttctggaggcgcagggctcgccg
ctgaccaacaagtatgccgaaggctatcccggcaagcgatattatggcggctgcgagttt
gtcgacatcgccgaagagctggcgattgagcgcgcgaagaagctgttcgacgcggcctat
gcgaacgttcagcccaattctggcagccaggccaatcaggctgtgtttctggctctgctg
aaacctggcgaccgtatcctcggcctcgacctttcggccggcggtcacctgacccatggt
gcgcggccaaacatgtccggcaaatggttcgaggcgcatcattatggtgtgcgcgagagc
gatgcgctgattgattatgacaagctgcgcgagcaggcgctggaactgcgcccgcaaatg
attattgccggtggttcggcctatccgcgcgagatcgacttcaagaaattccgcgcaatc
gccgatgaggctggcgcgctgcttctggtcgatatggcccatttcgccgggctggcggca
gcaggcgtctatcccaacccggtgccgcatgccgatgtggtgacaaccacgacgcacaag
acgctgcgcggcccgcgcggcggcatggtgctttcgcgcgatgtggatatcggcaagaag
atcaattcggctgtgttccccggcctgcagggcggcccgctgatgcacgtcattgccggc
aaggccgttgcgttcggcgaggcgttgcgccctgagttcaagcagtatgccgccaatgtg
gtggagaactgccgggccatggcgggcgccctgtctgatgccggctacgcggtggtgtcc
ggcgggaccgacagccatctggccctgatcgatctgcgcccgaaaaagctgaccggagac
atttccgaggcggcgctggaacgcgcccacatgacctgcaacaagaacggggtgccgttt
gatccggaaaagccgaccgtcacttcgggcctgcgtattggcgcgccggcaggaaccaca
cgcggctttggcgtggctgaattccgccgcgtcggtgagatgatggctgacgtgctggat
gcgctggccgataatcgtgacggcgacgcgcaggtcgaagcgcgcgtacgcgaggaagtt
atcgccatgtgcaagcgcttcccgatctatcccgagcttggctag
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