Glycocaulis abyssi: AB6B38_04615
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Entry
AB6B38_04615 CDS
T10778
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gaby Glycocaulis abyssi
Pathway
gaby03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gaby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB6B38_04615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaby03400
]
AB6B38_04615
Enzymes [BR:
gaby01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AB6B38_04615
DNA repair and recombination proteins [BR:
gaby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AB6B38_04615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
XER18194
LinkDB
All DBs
Position
930778..931428
Genome browser
AA seq
216 aa
AA seq
DB search
MKHSVPAEPQPDCPLCPRLVAYRQENARQEPGWFNGAVPSFGDANARLLIVGLAPGRTGA
NRTARPFTGDWAGDLLYATIDAYGFSKGTYKADPADGLTLHDAMITNAVRCAPPQNKPVG
KEMANCRPFLAARIAALPRLKVVIALGRIAHENTLRALGQRPAGFKFAHGAEHEVEGPQG
PLTLIDSYHCSRYNTNTGRLTEPMFHAVFEKAKARL
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatagcgtcccggccgagccgcaacccgattgcccgctctgtccgcgccttgtc
gcctaccggcaggaaaacgcccgtcaggagccgggctggttcaacggtgccgtaccctcc
ttcggtgacgccaacgcgcgcctgctgatcgtagggctggcgccggggcgtacaggggcg
aaccgcaccgcccggccgttcaccggcgactgggcgggcgatctgctctacgcgaccatt
gatgcctatggcttttcaaaaggcacctataaggccgacccagctgatggcctgaccctg
cacgatgcgatgatcaccaatgccgtgcgctgcgcgccgccgcagaacaagccggtgggc
aaggaaatggccaattgccgccccttcctggccgcgcgcatcgcggccttgcccaggctg
aaagtggtgatcgctctggggcgtatcgcgcatgagaacacgctgcgcgcgctgggccag
cgtccagcgggtttcaagtttgcccacggggcggagcatgaggtggaaggcccgcaaggc
cccctcaccctgatcgatagctatcactgctcacgctacaacacgaacacgggccggctg
acagagcccatgttccatgctgtgttcgagaaggccaaagcgcggctttag
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