Glycocaulis abyssi: AB6B38_04885
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Entry
AB6B38_04885 CDS
T10778
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
gaby Glycocaulis abyssi
Brite
KEGG Orthology (KO) [BR:
gaby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gaby03032
]
AB6B38_04885 (gyrA)
03400 DNA repair and recombination proteins [BR:
gaby03400
]
AB6B38_04885 (gyrA)
Enzymes [BR:
gaby01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AB6B38_04885 (gyrA)
DNA replication proteins [BR:
gaby03032
]
Prokaryotic type
DNA Topoisomerases
AB6B38_04885 (gyrA)
DNA repair and recombination proteins [BR:
gaby03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AB6B38_04885 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SurA_N_3
Motif
Other DBs
NCBI-ProteinID:
XER18684
LinkDB
All DBs
Position
complement(991388..994186)
Genome browser
AA seq
932 aa
AA seq
DB search
MNGGAAGGQPPRPDGGPMVSIEDEMRRSYLDYAMSVIVSRAIPDARDGLKPVHRRILWSM
HEQGYTHDKQYRKSARVVGDVIGKYHPHGDQAVYDALARMAQDFSMGLKLLDGQGNFGSV
DGDPPAAMRYTEVRMDKPAEALLADIDKETVDYRENYDASEKEPIVLPARFPNLLVNGAG
GIAVGMATNIPPHNLGEVVDATVALLEDPELSDLDLLEYVPAPDFPTGGEIIGRTGARNG
LLTGRGSVLVRGKTSIEEIRKDRQAILIHEIPYQVNKASMIEKIAELVREKRIEGISDLR
DESDRSGMRVVVELKRDANAEVILNQLYRWSPLQTSFGVNMLALIGGKPQLAGLKTYLET
FIAFRKEVTARRAKFDLKKARDRAHILIGLGIAVANIDEVIRLIRAAPDPATAREQLKER
AWPAADIAPLVALVADPRSIILDNQTIHLTDEQARAILELRLNRLTALGRDEISGEAEKL
AVEIADLLDILKSPVRIREIVKAELLDAKERFGVPRRSALVEGDFEIEDEDLIPREEMVV
TLTHGGYVKRTPLSLYRAQNRGGRGRAGMAMKDEDFVSTLFVASTHAPLLFFTSDGMVYK
TKTWRLPQGAPNTKGKYLTNLLPTLGEGARVTSIMALPEDEAEWSRFDVMFATTSGGVRR
NKLSDFVQVNRNGKIAMKLDEADGQILDVRLCHEGQDVLLATAKGKAIRFPVTDVRVFAS
RNSTGVRGIRMETGDTAISMAILNHVEISRAEVRAYLKRRRAEMRNEGDEELDAAEADIE
TGDEEEGEEITLSEVRYMELRAHEEILLNVVESGMGKRVISYEYYPQSRGGQGVWTKDKR
FPEPLAACFLIEEGDTVMAVTDGGQLIRFPVGTVRIASRATKGVRLIRLANDEKVVSVAR
IAKNEEAEGEEEADGAAGDADTAPETGPSGES
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcggcgcagcgggcggccagccgccccggcccgatggcggacccatggtctcc
atcgaggacgagatgcgccgctcctatctcgattacgcgatgagcgtgatcgtgagccgc
gccatccccgatgcgcgcgacggcctgaaacccgttcaccggcgcattctctggtcgatg
cacgagcagggctatactcacgacaagcaataccgcaaatcggcccgcgttgtcggtgac
gtgatcggtaaatatcacccgcacggcgaccaggcggtctatgacgcgctggcgcgcatg
gcgcaggacttctcgatggggctgaagctcctcgatggtcagggcaatttcggctcggtc
gatggcgatccgcccgccgccatgcgttacaccgaagtgcgcatggacaagcccgccgag
gcgctgctggccgatatcgacaaggaaacggtcgattaccgggaaaactacgacgcatcg
gaaaaagagccgattgtcctgcctgcccgcttccccaacctgctggtaaacggcgctggc
ggtatcgcggtcggcatggcgaccaatatcccgccgcacaatctgggcgaggtggtggac
gccaccgtggctttgctggaagacccggaactatctgatctcgatctgctggaatacgta
ccggcgccggattttcccactggcggcgagatcatcgggcgtacgggcgcgcgcaatggc
ctcttgaccgggcgcggctcggtgctggtgcgcggcaagacgtcgatcgaggaaatccgc
aaggaccgtcaggcgatcctcattcacgaaattccctatcaggtgaacaaggcttcgatg
atcgagaagatcgccgagctggtgcgtgaaaagcgcatcgagggcatttcagacctgcgc
gacgagtccgaccgttcgggcatgcgcgtggtggtcgagctgaaacgcgatgccaatgcc
gaagtgatcctgaaccagctttaccgctggagcccgctgcagacctcgttcggggtcaat
atgctggcgctgattggcggcaagccgcagctggcggggctgaagacctatctcgaaacc
ttcatcgccttccgcaaggaagtgacggcccgccgggccaagttcgacctgaaaaaggcg
cgcgaccgcgctcatattctgatcgggctgggcattgcggtggccaatatcgatgaggtg
atccgcctgatccgcgcagcgcccgatccggcgacggcccgcgagcagcttaaagagcgt
gcctggccggcggctgatatcgccccgctggtggcgctcgtggctgatccgcgctcgata
attctggacaaccagaccatccatctgaccgatgagcaggcgcgcgccattctggaactg
cgcctgaaccgcctgacggcgctggggcgtgacgagatttccggcgaggcggagaagctg
gcggtcgagattgccgacctgctggatatcctcaaaagcccggtgcgcatccgcgagatc
gtcaaggccgagctgctggatgccaaggagcgcttcggcgtgccgcgccgctccgcgctg
gtcgagggtgatttcgagatcgaggatgaagacctgatcccccgcgaggagatggtcgtc
acccttacccatggcggctatgtgaagcgcaccccgctctcgctctaccgggcgcagaac
cggggcgggcgcgggcgtgccggcatggcgatgaaggacgaggatttcgtctccacgctg
tttgttgcctccacccacgcgcctttgttgttcttcacctccgacggcatggtctacaag
accaagacctggcgcctgccgcagggcgcgcccaacaccaagggcaaatatctgacgaac
ctgctgccgacgcttggcgagggcgcgcgcgtcacctccatcatggcgctgccggaggac
gaggcggaatggagccggtttgatgtgatgttcgccaccacatcgggcggcgtccggcgc
aacaagctgtcggatttcgtccaggtgaaccgcaacggcaagatcgccatgaagctggac
gaggctgacggccagatcctcgatgtgcgcctgtgtcatgaggggcaggacgtgctgctg
gccacagccaaaggcaaggcgatccgcttccccgtcaccgatgtgcgcgtgttcgccagc
cgtaattccaccggcgtgcgcgggatacgcatggagacgggcgacacggccatctccatg
gctatcctcaatcatgtcgagatcagccgggcggaagtgcgcgcctatctcaagcgccgc
cgcgccgaaatgcgcaatgagggcgatgaggagctggatgcggccgaagccgatatcgag
actggcgacgaggaagagggcgaggaaatcaccctctccgaggtgcgctatatggagctt
cgcgcccatgaggagatactcctcaatgtcgtggaatccggcatgggcaagcgcgtcatc
tcctatgaatactacccgcagagccggggcggtcagggcgtatggaccaaggacaagcgc
ttccccgaaccgctggcggcctgcttcctgattgaggaaggcgataccgtgatggccgtt
accgatggtggccagctcatccgcttcccggtcggcaccgtgcgcattgccagccgcgcc
accaagggcgtgcgcctgatccgtcttgccaatgacgaaaaggtggtgtccgttgcgcgc
atcgccaagaacgaggaagccgagggcgaggaagaggctgacggggctgcaggcgatgcc
gatacggcaccggaaaccgggccatctggagaaagctga
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