Glycocaulis abyssi: AB6B38_07905
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Entry
AB6B38_07905 CDS
T10778
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
gaby Glycocaulis abyssi
Pathway
gaby00071
Fatty acid degradation
gaby00280
Valine, leucine and isoleucine degradation
gaby00310
Lysine degradation
gaby00362
Benzoate degradation
gaby00380
Tryptophan metabolism
gaby00410
beta-Alanine metabolism
gaby00640
Propanoate metabolism
gaby00650
Butanoate metabolism
gaby00907
Pinene, camphor and geraniol degradation
gaby00930
Caprolactam degradation
gaby01100
Metabolic pathways
gaby01110
Biosynthesis of secondary metabolites
gaby01120
Microbial metabolism in diverse environments
gaby01200
Carbon metabolism
gaby01212
Fatty acid metabolism
Module
gaby_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
gaby00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AB6B38_07905
00650 Butanoate metabolism
AB6B38_07905
09103 Lipid metabolism
00071 Fatty acid degradation
AB6B38_07905
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AB6B38_07905
00310 Lysine degradation
AB6B38_07905
00380 Tryptophan metabolism
AB6B38_07905
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AB6B38_07905
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AB6B38_07905
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AB6B38_07905
00930 Caprolactam degradation
AB6B38_07905
Enzymes [BR:
gaby01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
AB6B38_07905
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
AB6B38_07905
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
AB6B38_07905
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
UDPG_MGDP_dh_N
NAD_binding_2
F420_oxidored
Sacchrp_dh_NADP
DAO
2-Hacid_dh_C
Asp_aminotransf
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
XER16162
LinkDB
All DBs
Position
complement(1625578..1627776)
Genome browser
AA seq
732 aa
AA seq
DB search
MSYTHFKFELDGDGIALITFDSPNVSMNVLSAAVMAELGQIVDKIGSDDSIKGAVITSGK
KAFCAGADLSELGAGMMDLKGLSEEEAKQKLFDTAFRLNSQLRALETCGKPVAAAINGLA
LGGGFEVTLACHYRVMANDTGAKLGLPESLVGVLPGGGGTQRLPRLVGVMNAAPVMLQGK
QLDADTAKQQGVVHEVAPVSEIVAKAKELVKANPLGSKQPWDQDKFKIPGGGPFHPAGMQ
IFAGASPMLLKETYGNYPAQRYILSCVYEGLQVPIDAGLRIESRYFTKLLMRPESRNMIR
SLFLSKQSLDKGSRRPAGQEKSEIKKIGVIGAGFMGAGITTVSAQAGIEVVLIDVNQEGA
DKGKQHAVDFFAKGVKRGKISEEKAKKLADLITATTDYGALKDVDLVVEAVFENSDLKAE
ITKKAEAVMPKGAIFGSNTSTIPISSLAKASERPDNFIGIHFFSPVEKMNLVELIVGEKT
GDLAVSRAIDFVGKIKKTPIVVADTRGFYANRCVMRYIEQGMYLLTEGVKPALIENAAKM
AGMPVGPLSLQDEVAIDLGYKVLQQTKKDLGDQFEDTPNAQVIEKMYELGRYGRKNGKGF
YVYEEGGKRLWDELDQFAPGGKLLPAGEQPSVAEIKDRILYAQAIEAARTMAEGIVEDPR
EADVGSILGWGFAPYTGGVISFIDTVGTEKFVKRADELAKKYGKPFEVPQLLRDMAAKKE
TFYGRFAPKQAA
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgagctacacacatttcaaattcgaactggatggcgacggcattgccctcatcacgttc
gacagtccgaacgtatccatgaacgtgctttcggccgcggtcatggccgagctaggccag
attgtcgacaagatcggctcggatgattccatcaaaggcgcggtcattacctccggcaag
aaggcgttctgcgcaggcgcggacctctccgagctgggtgcaggcatgatggacctgaaa
ggcctctccgaagaggaagccaagcagaaactgtttgacaccgccttccgcctgaactcc
cagctccgcgcgctggaaacctgcggcaagccggtcgcggcggccattaatggcctggcg
cttggcggcgggttcgaggtgacgctggcctgccattaccgcgtgatggcaaacgatacc
ggtgccaagctcggcctgccggaaagccttgtcggcgttctgccgggcggtggcggcacg
cagcgcctgccgcgccttgtcggcgtgatgaatgcggccccggtcatgctccagggcaag
cagctggatgccgatacggccaagcagcagggcgtggtgcacgaagtggcgccggtctct
gaaatcgttgccaaggccaaggagctggtcaaagccaatccgctggggtccaaacagccc
tgggatcaggacaagttcaaaatccccggcggtggtcctttccacccggcgggcatgcag
attttcgcgggcgcatccccgatgctgctcaaagagacctacgggaactatccggcccag
cgctatatcctgtcctgcgtctatgagggcctgcaggtgccgatcgatgcgggtctgcgt
attgagagccgctacttcaccaagctgctgatgcgcccggaaagccgcaacatgatccgc
tcgctcttcctgtccaagcaatcgctggacaagggcagccgccgccccgccggtcaggag
aaatccgagatcaagaagatcggcgtcatcggcgcaggcttcatgggtgcaggcatcacc
accgtgtcggcccaggccgggatcgaggtcgtgctgatcgacgtcaatcaggaaggcgcc
gacaagggcaagcagcacgcggtcgacttcttcgccaagggcgtcaaacgcggcaagatc
agcgaggagaaggccaaaaagctggctgatctcatcacggccacgaccgattacggcgcg
ctgaaggacgttgatctggtcgtcgaggcggtgtttgaaaactccgacctgaaagccgag
atcaccaagaaagccgaagccgtgatgcccaagggcgcgatctttggttcgaacacctcc
accattccgatcagctcgctggcgaaggcttcggagcgtccggacaatttcatcggcatt
cacttcttctcgccggtcgaaaagatgaatctggtcgagctgattgttggcgagaagacg
ggcgatctcgccgtcagccgcgccatcgatttcgtcggcaagatcaagaagacgccgatt
gtggtggccgatacgcgcggcttctacgccaatcgctgcgtgatgcgctatatcgagcag
ggcatgtacctgctgaccgaaggcgtcaaacccgccctcatcgagaacgcggcgaaaatg
gcgggcatgcccgtcggcccgctctccctgcaggacgaggtggccatcgatctgggctac
aaggtgctccagcagaccaagaaggatctgggtgaccagttcgaggacacgcccaacgcg
caggtcatcgagaagatgtacgagctcggccgctatggccgcaagaatggcaagggcttc
tatgtctatgaggaaggcggcaagcggctgtgggacgaactcgatcagttcgctcctggc
ggcaaactcctccctgcgggcgagcagccgagcgtcgccgagatcaaggaccgtatcctc
tatgcgcaggccatcgaggcggcccgcaccatggctgaaggcatcgtcgaggacccgcgc
gaggccgatgtcggctccatcctgggctggggctttgcgccctataccggcggcgtgatc
tccttcatcgacaccgtcggtacggaaaagttcgtcaagcgtgcggacgagctggccaaa
aagtacggcaagccgttcgaggtgccgcagcttctgcgcgacatggcggcgaagaaagag
accttctacggccggtttgcgcccaagcaggcggcctga
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