Glycocaulis abyssi: AB6B38_09790
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Entry
AB6B38_09790 CDS
T10778
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
gaby Glycocaulis abyssi
Brite
Enzymes [BR:
gaby01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB6B38_09790 (addB)
DNA repair and recombination proteins [BR:
gaby03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AB6B38_09790 (addB)
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Ortholog
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GFIT
Other DBs
NCBI-ProteinID:
XER16517
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Position
complement(2028992..2032075)
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AA seq
1027 aa
AA seq
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MSAPIIFDTPAPRVFTLSPAADFLLSLARTLSEAFPEPEALAGVTVLLPTRRAGRALGEA
FSAIQAQKGIPAAILPLIRPLGDVDADEPPFEPGEFATLALPAISAARRRFELASLIIAR
ETASGREMAADGALVLADTLAGLLDEFASEGVDDLSGLDAAMRAALPQGRQEAAMFLDIV
LEAWPRHLAALGLVDPARRRSGLLNALAARWREVPPDGPVIAAGSTGSIPAAAELLATVC
RLEQGAVVLPGFAGFMDDSSWNAIDDGHPQRAMKSLIERIGISRQEVREWPIRERIYWPG
RSAEARARLVTEALRPADQTADWLLRLAALGKEWKGDIVKEGLRGLSVIEARDPASEARA
IALALRHTLTIPGRTAMVVTPDRALARRVTTEMARFDVRLDDSAGEALSDTAPGSFLVRV
LEAASDPGSALALTALWASPLFTLGRPRPALMAALTALEAKRLRGRRPGQSLGDVRARIK
DGDPDIWRVLIDEIEQGLTPLLALEGEQPVRVWAAALAQAGEALARGAAQAGADRLWAGE
AGEQAAGLMREFLEEADALPALSLRAFSRIWLETARARRVRPRSGTHPRLALLGPLEARL
LHADLVILAGLNEGVWPQAMAADPFLSRGMRKAAGLPSPERRLGLSAHDFAELASTAEVI
LTRSTMADGAPTVASRWMWRLQTLARGKLGADHVGDALKPDPDYAALASALDAPERVLLP
APEPLPTPPLADRPREMPVTGAETWVRDPYAVYAKRILKLRVLDPLDQEPGGAERGTAWH
AALEQWTRQLGDRPILPETAHAELVALGEAALLEAGFAQSDLGSELPRFSHAASWVVAWE
AERRVNGIVPAGQGVEAEGRIDIRAPGGPFRLTARADRIDSGPDGYHILDFKTGRIPSVK
EVLAGFSPQLTLQGAILAGGGFDGIPAGPIAGYAYIGVKGTKKPGEVRGITDQPPKGEPA
RNPEELADAALERLGRYIAKFDDPSTPYHSQPRRKFVNEYGDYDHLARRKEWSTAPDKES
GNGEDEA
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccccgataatctttgatacgcctgctccgcgcgttttcacgctgtctccggcg
gctgatttcctgctgtcactggcgcgcacgctctctgaggctttccccgaacccgaagcg
ctggcgggtgtcaccgtgttgctgccgacgcgccgggcgggccgggcgctcggtgaggcg
ttcagcgccatacaggcgcaaaaaggtattccggcggcgatattgccgctgatccgccca
ctgggcgatgtggacgcagacgaaccacccttcgagccgggcgagttcgccacgctcgcc
ctgcctgccatcagcgcggcgcggcggcgctttgaactggccagcctcatcatcgcccgc
gagacggcatcaggccgggagatggccgccgatggcgcactggtgctggccgatacgctg
gccggcctgctggacgaatttgcctctgaaggcgttgacgatctgtcgggtctggacgcg
gctatgcgcgccgcgctgccgcaagggcggcaggaagcggcgatgttcctggacatcgtg
ctggaggcatggccccggcatctggctgcgttggggctggtggatccggcccgccgccgc
tccgggcttctgaacgcgctcgccgcgcgctggcgtgaggtgccgcccgatggcccggta
atcgcggcaggctccacaggctccattccggcggcggctgaattgctggccacggtctgc
aggcttgagcagggcgcggtcgtgctgccgggctttgccggcttcatggacgactccagc
tggaacgcgattgatgacggccatccgcaacgcgcgatgaaatctcttatcgagcgcatc
ggtatcagccggcaggaagtgcgtgagtggccaatccgtgaacggatatactggcccggc
cggtccgccgaggcgcgggcgcggcttgtaacggaggctttgcgtccggcggaccagacc
gccgactggctgttgcggcttgcagctttgggaaaggaatggaagggcgatatcgtgaag
gaggggctgcgcggcctctcggtcattgaggcgcgtgatccggccagcgaggcgcgggcg
attgcgctggccttgcgccatacactgacaataccggggcgtaccgccatggtcgtcacg
ccggaccgcgcactggcgcggcgtgtcaccaccgaaatggcgcgctttgatgtccggctt
gatgacagtgcgggcgaagccttgagcgatacggcgccgggcagctttctcgtccgcgtg
ctggaagctgcgagcgatcccggctccgcgctggccctgacggccttgtgggcctcgccc
ctgttcacgcttggacggccgcggcccgccctgatggcggcgctgacggcgttggaggca
aagcgcttgcgcgggcgcaggcccggccagtcgctgggtgatgtgcgtgcacggataaag
gatggcgacccggatatatggcgtgtgctgatcgatgagatcgagcagggcctgaccccg
ctcctcgcccttgagggtgaacagcctgtgcgcgtgtgggcagctgctctggcgcaggcc
ggcgaagcgctggcgcgcggtgcggcgcaggcgggggcagaccggctctgggccggggaa
gcgggtgagcaggccgccgggctgatgcgggaatttctggaggaggcggacgccctgccg
gctctgtccttgcgggccttctcgcggatatggctggaaaccgcgcgcgcccggcgcgtg
cgcccgcgctccggcacgcatccaagactggctctgctcggcccgctcgaagcgcgcctg
cttcacgctgatctggtaatcctggctgggctaaacgaaggcgtgtggccgcaggccatg
gccgccgatcccttcctgtcgcgcgggatgcgcaaggcagccggcttgccctcgcccgaa
cgcaggctgggcctttccgcccacgattttgccgagcttgcctccaccgcagaggtgatc
cttacacgctccaccatggctgatggtgcgcccacggtcgcatcgcgctggatgtggcga
ttgcagacgctcgcgcgcggcaagctgggagcggaccatgtgggcgatgccctgaaaccg
gaccccgattatgcggcgcttgccagcgcgctggacgcccctgaaagggttctgttgccc
gctccggagcccttgcccaccccgcctctcgccgaccggccccgcgaaatgccggttact
ggcgcggagacatgggtacgtgatccgtatgcggtatatgcaaaacggatattgaagctg
agagtgcttgatccgctggatcaggagcccggcggcgccgagcgcgggacggcgtggcat
gcggcactggaacaatggacgcgccagctgggtgaccggcccatactccccgaaaccgcg
catgctgagctggtggcgctgggcgaggccgccctgctggaggccggatttgcccaaagc
gatctgggaagcgagctgccccgcttttcccacgcggccagctgggtcgtggcctgggag
gctgaacgccgcgtcaatggcatcgtcccggcgggccaaggcgttgaagccgaaggccgg
atcgatattcgcgcgcccggcggcccgttccgcctgacggccagagccgaccggatcgat
agcggtcctgacggatatcacatcctggatttcaagaccgggagaattcccagcgtcaag
gaggtgctggccgggttctcgccccagctcacactgcagggcgcgatactggcgggcggc
ggatttgacggtattccggccgggccgatcgccggctatgcctatatcggcgtcaaaggc
accaaaaagccaggcgaggttcgcggcatcaccgaccagccgcccaagggtgagccggcg
cgcaaccctgaagagctggccgacgcggcgctggagcggctggggcgctatatcgccaaa
ttcgatgatccgtctacgccctatcatagccaaccgcggcgcaaattcgtcaatgagtat
ggcgattacgaccatcttgcccgccgcaaggaatggtcgacggcgccggacaaggagagc
ggcaacggggaggatgaggcatga
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