KEGG   Glycocaulis abyssi: AB6B38_10375
Entry
AB6B38_10375      CDS       T10778                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
gaby  Glycocaulis abyssi
Pathway
gaby00010  Glycolysis / Gluconeogenesis
gaby00020  Citrate cycle (TCA cycle)
gaby00260  Glycine, serine and threonine metabolism
gaby00280  Valine, leucine and isoleucine degradation
gaby00310  Lysine degradation
gaby00380  Tryptophan metabolism
gaby00620  Pyruvate metabolism
gaby00630  Glyoxylate and dicarboxylate metabolism
gaby00640  Propanoate metabolism
gaby00670  One carbon pool by folate
gaby00785  Lipoic acid metabolism
gaby01100  Metabolic pathways
gaby01110  Biosynthesis of secondary metabolites
gaby01120  Microbial metabolism in diverse environments
gaby01200  Carbon metabolism
gaby01210  2-Oxocarboxylic acid metabolism
gaby01240  Biosynthesis of cofactors
Module
gaby_M00009  Citrate cycle (TCA cycle, Krebs cycle)
gaby_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
gaby_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
gaby_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
gaby_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:gaby00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    AB6B38_10375 (lpdA)
   00020 Citrate cycle (TCA cycle)
    AB6B38_10375 (lpdA)
   00620 Pyruvate metabolism
    AB6B38_10375 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    AB6B38_10375 (lpdA)
   00640 Propanoate metabolism
    AB6B38_10375 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    AB6B38_10375 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    AB6B38_10375 (lpdA)
   00310 Lysine degradation
    AB6B38_10375 (lpdA)
   00380 Tryptophan metabolism
    AB6B38_10375 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    AB6B38_10375 (lpdA)
   00670 One carbon pool by folate
    AB6B38_10375 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gaby04147]
    AB6B38_10375 (lpdA)
Enzymes [BR:gaby01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     AB6B38_10375 (lpdA)
Exosome [BR:gaby04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   AB6B38_10375 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored HI0933_like NAD_binding_8 GIDA FAD_binding_2 AlaDh_PNT_C Thi4 Lys_Orn_oxgnase DAO FAD_binding_3 3HCDH_N Lycopene_cycl
Other DBs
NCBI-ProteinID: XER16631
LinkDB
Position
2149085..2150488
AA seq 467 aa
MADTYDVVIIGGGPGGYNCAIRAGQLGLKTAIIEMRKTLGGTCLNVGCIPSKALLHASEL
YEMANSEFAGMGIGTGKITLNLEKMMEQKADAVTGLTKGVAGLMKKNKVDHFHGKGRIAG
KGKVVVALEDGSEKTLETKNIVIATGSEVTPLPGVEIDEKQIVSSTGALELESVPEKLIL
IGAGVIGLELGSVWRRLGSQVTVVEYLDRVLPTMDGEISKQAKRLFEKQGMIFKLSRKVT
GVEKDGKALKVTTEAASGGEEEVLDADVVLVCIGRRPYTDGLGLETVGIEPDKRGFIPNE
HFKTSADGVWVIGDTTHGPMLAHKAEDDGTACAELIAGKAGHVNYLATPSVVYTRPEIAS
VGYTEEQLKEMGREYKTGKFPFMANSRARTNHDTDGFVKILADAKTDEILGGHIMGPHAG
EMIGEIALAMEFRAASEDIARTSHAHPTLSEAIRQAAMGVEGWTMQM
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggctgacacgtatgacgttgtaatcattggcggcggacccggtggctataattgcgcg
atccgcgcggggcagctgggcctgaagaccgccattatcgagatgcgcaagacgctcggc
ggcacctgcctgaatgtcggctgcatcccctccaaggcgctgctgcatgcctccgagctt
tacgagatggccaatagcgagtttgccggcatgggcatcggcaccggcaagatcacgctc
aatctggaaaagatgatggagcagaaggccgacgccgtgacgggcctgaccaagggcgtc
gccggcctgatgaagaagaacaaggtcgatcatttccacggcaagggccgcattgccggc
aagggcaaggttgttgtcgcgctggaagacggctcggaaaagacgctggagacaaagaac
attgtcatcgcgacgggttcagaagtaaccccgctgccgggcgtggagatcgatgaaaag
cagatcgtctcctccaccggcgcgctggagctggagagcgttccggagaagctgatcctc
atcggcgcgggcgtgatcgggctggagctcggctctgtctggcgccgtctgggatcgcaa
gtgacagtggtggagtatctcgaccgcgtcctgccgaccatggatggcgagatttccaag
caggccaagcgcctgtttgaaaagcagggcatgatcttcaagctgtcgcgcaaggtgacc
ggcgtggagaaagacggcaaggcgctcaaagtaacgaccgaggccgccagcggcggcgag
gaagaggtgctggacgccgatgtggtgctggtctgcatcgggcgtcgtccttatacggat
ggtctgggcctggagacggttggcatcgagcccgacaagcgcggcttcatccccaacgag
cacttcaagacctcggcagatggcgtctgggtgatcggcgacaccacgcacgggccgatg
ctggcccacaaggccgaggatgacggcacggcctgcgccgagctgattgcgggcaaggcg
ggtcatgtgaactatctggccacgcccagtgtcgtctatacgcgccccgagatcgccagt
gtcggctataccgaggagcaattgaaggagatgggccgggagtacaaaaccggtaaattc
cccttcatggccaatagccgcgcacgcaccaatcacgatacggacggttttgtgaaaatc
ctcgccgatgcaaagaccgatgaaatcctcggcggccacatcatgggcccgcatgcaggc
gagatgatcggcgagatcgcgctggccatggagttccgcgcggcatccgaagatattgcc
cgcaccagccacgcccaccccaccctgtccgaggccatccgccaggcagcaatgggggtg
gagggctggaccatgcaaatgtag

DBGET integrated database retrieval system