Glycocaulis abyssi: AB6B38_10650
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Entry
AB6B38_10650 CDS
T10778
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gaby Glycocaulis abyssi
Brite
KEGG Orthology (KO) [BR:
gaby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gaby03016
]
AB6B38_10650 (truB)
Enzymes [BR:
gaby01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AB6B38_10650 (truB)
Transfer RNA biogenesis [BR:
gaby03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AB6B38_10650 (truB)
Prokaryotic type
AB6B38_10650 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
XER16684
LinkDB
All DBs
Position
complement(2199686..2200645)
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AA seq
319 aa
AA seq
DB search
MARRKKGNPVDGWVLLDKPAEMTSTQAVSAVRRIFDARKAGHAGTLDPLATGLLPIALGE
ATKTVPFAQDGMKTYRFTIRWGISTDTLDAEGEETATSDVRPARAAIEAVLPRFVGEIDQ
IPPAFSAIRVDGARAYDLARAGETVELDARTVRIDAVSLLDTPSADLAVLEMQCGKGTYV
RSLVRDIAAALGAEGHVAALRRVAVGPFDIADALTLADLDGLKAEGREAQALEPVHAAAS
DLPVLDVTPDQVAYLRQGRAIVVPPRRVEALRALRCERWVGDRDCSRSVLAMDGDNPVAI
GDLQAGKLSPWRVFAASGA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaggaaaaagggtaatccggtcgatggctgggtcttgctggacaagcccgcc
gagatgacctccacgcaggccgtgtcggccgtgcggcgcatttttgacgctcgcaaggcc
ggccatgccggcacgctcgatccgctggcgacggggcttttgccgattgcgctgggtgag
gccaccaagaccgtgccgttcgcgcaggacggcatgaagacctatcgcttcacaatccgc
tggggcatctccaccgatacgctggacgccgagggcgaggagacggccaccagcgatgtg
cgccctgcacgcgcggccatcgaggctgtcctgccgcgctttgtcggcgagatagaccag
ataccgcctgccttctcggccattcgcgtggatggcgcgcgtgcctatgatctggcgcgt
gcaggcgagacggtagagctggacgcgcgcacggtgcgcatcgatgcggtgtccctgctc
gatacgccgtcggcggacctggctgttctggaaatgcagtgtggcaaaggcacctatgtg
cgctctctggtgcgcgatatcgcggcggcgctgggcgcggaggggcatgtcgccgcgctg
cgccgggtcgcggtcgggccgtttgatatcgctgatgccctcacgctggctgatctcgat
ggactgaaagctgaggggcgcgaggcgcaagcgctcgagccggtccatgccgctgccagc
gatctgccggtactggatgtaacccctgatcaggtggcttacttacgccagggccgggcc
attgtggtgccgccgcgccgggtggaagcactgcgggcgctgcgctgtgagcgctgggta
ggtgaccgggactgttcgcgctcggtgctggccatggacggcgataatccggtggccatt
ggcgaccttcaggcaggcaagctctcgccctggcgggtattcgcggcgtccggtgcctga
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